Protein–RNA interactions for Protein: P51954

Nek1, Serine/threonine-protein kinase Nek1, mousemouse

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek1P51954 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.18■□□□□ 0.66
Nek1P51954 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nek1P51954 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC19.18■□□□□ 0.66
Nek1P51954 Ddx41-204ENSMUST00000224765 2199 ntBASIC19.18■□□□□ 0.66
Nek1P51954 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nek1P51954 Mir6349-201ENSMUST00000184059 97 ntBASIC19.18■□□□□ 0.66
Nek1P51954 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nek1P51954 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
Nek1P51954 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nek1P51954 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nek1P51954 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Nek1P51954 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Nek1P51954 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nek1P51954 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nek1P51954 Gm15565-201ENSMUST00000118890 427 ntBASIC19.17■□□□□ 0.66
Nek1P51954 Gm11643-201ENSMUST00000119578 864 ntBASIC19.17■□□□□ 0.66
Nek1P51954 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nek1P51954 AC153881.1-201ENSMUST00000214448 284 ntBASIC19.17■□□□□ 0.66
Nek1P51954 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
Nek1P51954 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nek1P51954 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nek1P51954 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
Nek1P51954 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nek1P51954 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Nek1P51954 Gm15743-202ENSMUST00000182690 1901 ntBASIC19.17■□□□□ 0.66
Nek1P51954 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Nek1P51954 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Nek1P51954 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nek1P51954 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nek1P51954 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nek1P51954 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nek1P51954 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Nek1P51954 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nek1P51954 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nek1P51954 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nek1P51954 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nek1P51954 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nek1P51954 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nek1P51954 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nek1P51954 Gm10698-201ENSMUST00000182663 604 ntBASIC19.16■□□□□ 0.66
Nek1P51954 Gm10138-203ENSMUST00000206952 366 ntBASIC19.16■□□□□ 0.66
Nek1P51954 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nek1P51954 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC19.16■□□□□ 0.66
Nek1P51954 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nek1P51954 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nek1P51954 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nek1P51954 Gm19721-201ENSMUST00000195284 1764 ntBASIC19.16■□□□□ 0.66
Nek1P51954 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nek1P51954 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nek1P51954 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nek1P51954 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nek1P51954 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nek1P51954 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nek1P51954 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nek1P51954 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Nek1P51954 Gm15378-201ENSMUST00000121894 207 ntBASIC19.15■□□□□ 0.66
Nek1P51954 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Nek1P51954 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.15■□□□□ 0.66
Nek1P51954 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Nek1P51954 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nek1P51954 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Nek1P51954 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nek1P51954 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nek1P51954 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nek1P51954 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC19.15■□□□□ 0.66
Nek1P51954 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nek1P51954 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nek1P51954 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nek1P51954 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Nek1P51954 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Nek1P51954 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
Nek1P51954 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Nek1P51954 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nek1P51954 Gm37055-201ENSMUST00000191866 133 ntBASIC19.14■□□□□ 0.65
Nek1P51954 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nek1P51954 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC19.14■□□□□ 0.65
Nek1P51954 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Nek1P51954 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.14■□□□□ 0.65
Nek1P51954 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.14■□□□□ 0.65
Nek1P51954 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Nek1P51954 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nek1P51954 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nek1P51954 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nek1P51954 Gm15375-201ENSMUST00000119510 849 ntBASIC19.13■□□□□ 0.65
Nek1P51954 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Nek1P51954 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC19.13■□□□□ 0.65
Nek1P51954 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Nek1P51954 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Nek1P51954 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nek1P51954 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nek1P51954 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Nek1P51954 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Nek1P51954 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC19.13■□□□□ 0.65
Nek1P51954 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nek1P51954 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nek1P51954 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC19.13■□□□□ 0.65
Nek1P51954 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Nek1P51954 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.13■□□□□ 0.65
Nek1P51954 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nek1P51954 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms