Protein–RNA interactions for Protein: P49698

Hnf4a, Hepatocyte nuclear factor 4-alpha, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hnf4aP49698 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hnf4aP49698 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Hnf4aP49698 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hnf4aP49698 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hnf4aP49698 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Hnf4aP49698 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
Hnf4aP49698 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Hnf4aP49698 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.67■□□□□ 0.26
Hnf4aP49698 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.67■□□□□ 0.26
Hnf4aP49698 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Hnf4aP49698 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.67■□□□□ 0.26
Hnf4aP49698 Gm20760-201ENSMUST00000179197 648 ntBASIC16.67■□□□□ 0.26
Hnf4aP49698 Gm4974-201ENSMUST00000209974 875 ntBASIC16.67■□□□□ 0.26
Hnf4aP49698 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.67■□□□□ 0.26
Hnf4aP49698 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.67■□□□□ 0.26
Hnf4aP49698 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hnf4aP49698 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Hnf4aP49698 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hnf4aP49698 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Hnf4aP49698 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Hnf4aP49698 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hnf4aP49698 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hnf4aP49698 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hnf4aP49698 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Hnf4aP49698 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hnf4aP49698 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Hnf4aP49698 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hnf4aP49698 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hnf4aP49698 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Hnf4aP49698 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Hnf4aP49698 Gm43183-201ENSMUST00000200632 547 ntBASIC16.66■□□□□ 0.26
Hnf4aP49698 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.66■□□□□ 0.26
Hnf4aP49698 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hnf4aP49698 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Hnf4aP49698 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hnf4aP49698 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Hnf4aP49698 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hnf4aP49698 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.66■□□□□ 0.26
Hnf4aP49698 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hnf4aP49698 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hnf4aP49698 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hnf4aP49698 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Hnf4aP49698 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.65■□□□□ 0.26
Hnf4aP49698 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hnf4aP49698 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hnf4aP49698 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hnf4aP49698 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Hnf4aP49698 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hnf4aP49698 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Hnf4aP49698 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Hnf4aP49698 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Hnf4aP49698 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Hnf4aP49698 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.65■□□□□ 0.26
Hnf4aP49698 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC16.65■□□□□ 0.26
Hnf4aP49698 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.65■□□□□ 0.26
Hnf4aP49698 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hnf4aP49698 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.65■□□□□ 0.26
Hnf4aP49698 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hnf4aP49698 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Hnf4aP49698 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hnf4aP49698 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hnf4aP49698 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.65■□□□□ 0.26
Hnf4aP49698 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Hnf4aP49698 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Hnf4aP49698 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.64■□□□□ 0.26
Hnf4aP49698 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
Hnf4aP49698 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hnf4aP49698 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hnf4aP49698 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hnf4aP49698 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hnf4aP49698 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Hnf4aP49698 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Hnf4aP49698 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.64■□□□□ 0.25
Hnf4aP49698 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Hnf4aP49698 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hnf4aP49698 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hnf4aP49698 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Hnf4aP49698 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hnf4aP49698 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Hnf4aP49698 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hnf4aP49698 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Hnf4aP49698 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hnf4aP49698 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hnf4aP49698 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hnf4aP49698 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hnf4aP49698 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hnf4aP49698 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Hnf4aP49698 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hnf4aP49698 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Hnf4aP49698 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Hnf4aP49698 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hnf4aP49698 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hnf4aP49698 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hnf4aP49698 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Hnf4aP49698 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hnf4aP49698 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.63■□□□□ 0.25
Hnf4aP49698 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Hnf4aP49698 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.63■□□□□ 0.25
Hnf4aP49698 Gm10517-202ENSMUST00000192970 758 ntBASIC16.63■□□□□ 0.25
Hnf4aP49698 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms