Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sdc2P43407 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Sdc2P43407 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Sdc2P43407 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sdc2P43407 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sdc2P43407 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sdc2P43407 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC19.32■□□□□ 0.68
Sdc2P43407 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sdc2P43407 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sdc2P43407 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Sdc2P43407 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Sdc2P43407 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sdc2P43407 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sdc2P43407 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sdc2P43407 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sdc2P43407 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sdc2P43407 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sdc2P43407 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sdc2P43407 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Sdc2P43407 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Sdc2P43407 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sdc2P43407 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC19.31■□□□□ 0.68
Sdc2P43407 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC19.31■□□□□ 0.68
Sdc2P43407 Gm13158-201ENSMUST00000122007 736 ntBASIC19.31■□□□□ 0.68
Sdc2P43407 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sdc2P43407 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC19.31■□□□□ 0.68
Sdc2P43407 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sdc2P43407 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sdc2P43407 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Sdc2P43407 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sdc2P43407 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sdc2P43407 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sdc2P43407 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sdc2P43407 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC19.3■□□□□ 0.68
Sdc2P43407 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sdc2P43407 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sdc2P43407 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sdc2P43407 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sdc2P43407 Gm27275-201ENSMUST00000184318 272 ntBASIC19.3■□□□□ 0.68
Sdc2P43407 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sdc2P43407 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Sdc2P43407 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Sdc2P43407 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Sdc2P43407 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sdc2P43407 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Sdc2P43407 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Sdc2P43407 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Sdc2P43407 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
Sdc2P43407 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Sdc2P43407 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC19.29■□□□□ 0.68
Sdc2P43407 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sdc2P43407 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sdc2P43407 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
Sdc2P43407 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sdc2P43407 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC19.29■□□□□ 0.68
Sdc2P43407 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sdc2P43407 Gm43548-201ENSMUST00000197139 2353 ntBASIC19.29■□□□□ 0.68
Sdc2P43407 Gm16401-202ENSMUST00000197463 2074 ntBASIC19.29■□□□□ 0.68
Sdc2P43407 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sdc2P43407 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sdc2P43407 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Sdc2P43407 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Sdc2P43407 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sdc2P43407 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC19.28■□□□□ 0.68
Sdc2P43407 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sdc2P43407 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.28■□□□□ 0.68
Sdc2P43407 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sdc2P43407 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sdc2P43407 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sdc2P43407 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sdc2P43407 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.28■□□□□ 0.68
Sdc2P43407 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Sdc2P43407 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC19.28■□□□□ 0.68
Sdc2P43407 AC166341.7-201ENSMUST00000221698 126 ntBASIC19.28■□□□□ 0.68
Sdc2P43407 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sdc2P43407 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Sdc2P43407 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC19.28■□□□□ 0.68
Sdc2P43407 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sdc2P43407 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Sdc2P43407 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
Sdc2P43407 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sdc2P43407 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sdc2P43407 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sdc2P43407 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Sdc2P43407 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Sdc2P43407 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sdc2P43407 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sdc2P43407 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sdc2P43407 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Sdc2P43407 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
Sdc2P43407 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.27■□□□□ 0.68
Sdc2P43407 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC19.27■□□□□ 0.68
Sdc2P43407 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sdc2P43407 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Sdc2P43407 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Sdc2P43407 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sdc2P43407 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Sdc2P43407 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Sdc2P43407 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Sdc2P43407 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms