Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmx3P42581 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmx3P42581 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Hmx3P42581 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmx3P42581 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.38□□□□□ -0.11
Hmx3P42581 Gm43213-201ENSMUST00000151866 1790 ntBASIC14.38□□□□□ -0.11
Hmx3P42581 Gm42642-201ENSMUST00000200683 355 ntBASIC14.38□□□□□ -0.11
Hmx3P42581 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmx3P42581 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmx3P42581 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Hmx3P42581 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
Hmx3P42581 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmx3P42581 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Hmx3P42581 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hmx3P42581 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hmx3P42581 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmx3P42581 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmx3P42581 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmx3P42581 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmx3P42581 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC14.38□□□□□ -0.11
Hmx3P42581 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Hmx3P42581 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmx3P42581 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.38□□□□□ -0.11
Hmx3P42581 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmx3P42581 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hmx3P42581 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hmx3P42581 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmx3P42581 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Hmx3P42581 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Hmx3P42581 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmx3P42581 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Hmx3P42581 Nespas-201ENSMUST00000143738 1083 ntBASIC14.37□□□□□ -0.11
Hmx3P42581 Gm6420-201ENSMUST00000193885 723 ntBASIC14.37□□□□□ -0.11
Hmx3P42581 Gm10033-202ENSMUST00000211874 928 ntBASIC14.37□□□□□ -0.11
Hmx3P42581 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmx3P42581 Gm45906-201ENSMUST00000208911 1430 ntBASIC14.37□□□□□ -0.11
Hmx3P42581 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Hmx3P42581 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmx3P42581 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmx3P42581 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmx3P42581 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmx3P42581 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Hmx3P42581 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Hmx3P42581 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Hmx3P42581 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Hmx3P42581 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmx3P42581 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Hmx3P42581 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmx3P42581 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hmx3P42581 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmx3P42581 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Hmx3P42581 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmx3P42581 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
Hmx3P42581 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC14.36□□□□□ -0.11
Hmx3P42581 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmx3P42581 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hmx3P42581 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmx3P42581 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmx3P42581 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Hmx3P42581 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmx3P42581 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmx3P42581 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hmx3P42581 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmx3P42581 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hmx3P42581 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hmx3P42581 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Hmx3P42581 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hmx3P42581 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmx3P42581 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmx3P42581 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Hmx3P42581 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmx3P42581 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmx3P42581 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hmx3P42581 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmx3P42581 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hmx3P42581 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hmx3P42581 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmx3P42581 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hmx3P42581 Gm7514-201ENSMUST00000209475 934 ntBASIC14.35□□□□□ -0.11
Hmx3P42581 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC14.35□□□□□ -0.11
Hmx3P42581 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmx3P42581 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmx3P42581 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmx3P42581 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Hmx3P42581 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmx3P42581 AC131586.2-201ENSMUST00000228370 1512 ntBASIC14.35□□□□□ -0.11
Hmx3P42581 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hmx3P42581 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmx3P42581 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Hmx3P42581 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hmx3P42581 Gm10655-201ENSMUST00000098658 1397 ntBASIC14.34□□□□□ -0.11
Hmx3P42581 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmx3P42581 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmx3P42581 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Hmx3P42581 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Hmx3P42581 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC14.34□□□□□ -0.11
Hmx3P42581 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmx3P42581 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmx3P42581 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC14.34□□□□□ -0.11
Hmx3P42581 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms