Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC19.1■□□□□ 0.65
Hoxc6P10629 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hoxc6P10629 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Hoxc6P10629 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hoxc6P10629 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hoxc6P10629 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hoxc6P10629 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hoxc6P10629 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hoxc6P10629 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Hoxc6P10629 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Hoxc6P10629 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC19.09■□□□□ 0.65
Hoxc6P10629 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Hoxc6P10629 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
Hoxc6P10629 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hoxc6P10629 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Hoxc6P10629 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Hoxc6P10629 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hoxc6P10629 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Hoxc6P10629 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Hoxc6P10629 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Hoxc6P10629 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Hoxc6P10629 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Hoxc6P10629 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Hoxc6P10629 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Hoxc6P10629 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.08■□□□□ 0.64
Hoxc6P10629 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Hoxc6P10629 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Hoxc6P10629 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Hoxc6P10629 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Hoxc6P10629 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hoxc6P10629 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hoxc6P10629 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Hoxc6P10629 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hoxc6P10629 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC19.07■□□□□ 0.64
Hoxc6P10629 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Hoxc6P10629 Gm6443-201ENSMUST00000203599 874 ntBASIC19.07■□□□□ 0.64
Hoxc6P10629 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hoxc6P10629 AC124569.2-201ENSMUST00000225998 818 ntBASIC19.07■□□□□ 0.64
Hoxc6P10629 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hoxc6P10629 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hoxc6P10629 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Hoxc6P10629 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hoxc6P10629 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hoxc6P10629 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hoxc6P10629 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
Hoxc6P10629 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hoxc6P10629 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.06■□□□□ 0.64
Hoxc6P10629 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hoxc6P10629 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hoxc6P10629 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hoxc6P10629 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Hoxc6P10629 Gm12895-201ENSMUST00000122214 226 ntBASIC19.06■□□□□ 0.64
Hoxc6P10629 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hoxc6P10629 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Hoxc6P10629 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Hoxc6P10629 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hoxc6P10629 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hoxc6P10629 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hoxc6P10629 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hoxc6P10629 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Hoxc6P10629 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hoxc6P10629 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hoxc6P10629 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hoxc6P10629 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
Hoxc6P10629 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Hoxc6P10629 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hoxc6P10629 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hoxc6P10629 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Hoxc6P10629 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC19.05■□□□□ 0.64
Hoxc6P10629 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC19.05■□□□□ 0.64
Hoxc6P10629 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hoxc6P10629 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hoxc6P10629 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hoxc6P10629 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hoxc6P10629 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hoxc6P10629 Mir8098-201ENSMUST00000184011 137 ntBASIC19.04■□□□□ 0.64
Hoxc6P10629 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.04■□□□□ 0.64
Hoxc6P10629 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hoxc6P10629 AC153889.1-201ENSMUST00000219257 330 ntBASIC19.04■□□□□ 0.64
Hoxc6P10629 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hoxc6P10629 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hoxc6P10629 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Hoxc6P10629 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hoxc6P10629 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hoxc6P10629 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hoxc6P10629 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxc6P10629 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxc6P10629 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
Hoxc6P10629 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxc6P10629 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxc6P10629 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxc6P10629 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxc6P10629 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxc6P10629 Gm5864-201ENSMUST00000202263 970 ntBASIC19.03■□□□□ 0.64
Hoxc6P10629 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxc6P10629 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxc6P10629 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxc6P10629 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxc6P10629 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.03■□□□□ 0.64
Hoxc6P10629 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms