Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ApoeP08226 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ApoeP08226 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ApoeP08226 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ApoeP08226 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ApoeP08226 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ApoeP08226 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.29■□□□□ 0.2
ApoeP08226 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ApoeP08226 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ApoeP08226 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.29■□□□□ 0.2
ApoeP08226 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
ApoeP08226 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ApoeP08226 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.28■□□□□ 0.2
ApoeP08226 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ApoeP08226 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ApoeP08226 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ApoeP08226 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
ApoeP08226 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ApoeP08226 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16.28■□□□□ 0.2
ApoeP08226 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC16.28■□□□□ 0.2
ApoeP08226 Gm10493-201ENSMUST00000097270 612 ntBASIC16.28■□□□□ 0.2
ApoeP08226 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
ApoeP08226 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
ApoeP08226 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ApoeP08226 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ApoeP08226 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
ApoeP08226 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ApoeP08226 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ApoeP08226 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ApoeP08226 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ApoeP08226 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ApoeP08226 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
ApoeP08226 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
ApoeP08226 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
ApoeP08226 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
ApoeP08226 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ApoeP08226 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ApoeP08226 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ApoeP08226 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ApoeP08226 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ApoeP08226 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.27■□□□□ 0.2
ApoeP08226 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.27■□□□□ 0.2
ApoeP08226 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.27■□□□□ 0.2
ApoeP08226 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC16.27■□□□□ 0.2
ApoeP08226 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.27■□□□□ 0.2
ApoeP08226 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ApoeP08226 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ApoeP08226 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ApoeP08226 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
ApoeP08226 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ApoeP08226 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
ApoeP08226 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ApoeP08226 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ApoeP08226 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
ApoeP08226 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ApoeP08226 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ApoeP08226 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ApoeP08226 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.26■□□□□ 0.19
ApoeP08226 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ApoeP08226 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ApoeP08226 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
ApoeP08226 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ApoeP08226 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
ApoeP08226 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ApoeP08226 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC16.26■□□□□ 0.19
ApoeP08226 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC16.26■□□□□ 0.19
ApoeP08226 Dancr-204ENSMUST00000132389 2347 ntBASIC16.26■□□□□ 0.19
ApoeP08226 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ApoeP08226 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ApoeP08226 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ApoeP08226 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ApoeP08226 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ApoeP08226 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ApoeP08226 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ApoeP08226 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ApoeP08226 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ApoeP08226 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
ApoeP08226 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ApoeP08226 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ApoeP08226 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
ApoeP08226 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ApoeP08226 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ApoeP08226 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ApoeP08226 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.25■□□□□ 0.19
ApoeP08226 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ApoeP08226 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ApoeP08226 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
ApoeP08226 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
ApoeP08226 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ApoeP08226 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
ApoeP08226 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ApoeP08226 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
ApoeP08226 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
ApoeP08226 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ApoeP08226 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.24■□□□□ 0.19
ApoeP08226 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
ApoeP08226 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
ApoeP08226 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ApoeP08226 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
ApoeP08226 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms