Protein–RNA interactions for Protein: P06328

Ig heavy chain V region VH558 B4, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06328 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
P06328 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
P06328 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
P06328 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
P06328 Gm15743-202ENSMUST00000182690 1901 ntBASIC12.62□□□□□ -0.39
P06328 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
P06328 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
P06328 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
P06328 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
P06328 Gm19721-201ENSMUST00000195284 1764 ntBASIC12.61□□□□□ -0.39
P06328 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
P06328 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
P06328 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
P06328 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
P06328 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC12.61□□□□□ -0.39
P06328 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
P06328 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
P06328 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
P06328 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
P06328 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
P06328 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
P06328 Gm43859-201ENSMUST00000200075 1412 ntBASIC12.61□□□□□ -0.39
P06328 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
P06328 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
P06328 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
P06328 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
P06328 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
P06328 Ddx41-204ENSMUST00000224765 2199 ntBASIC12.6□□□□□ -0.39
P06328 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC12.6□□□□□ -0.39
P06328 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
P06328 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
P06328 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC12.6□□□□□ -0.39
P06328 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
P06328 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
P06328 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
P06328 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
P06328 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
P06328 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
P06328 Gm15375-201ENSMUST00000119510 849 ntBASIC12.6□□□□□ -0.39
P06328 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
P06328 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC12.6□□□□□ -0.39
P06328 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC12.6□□□□□ -0.39
P06328 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
P06328 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
P06328 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC12.6□□□□□ -0.39
P06328 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
P06328 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
P06328 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
P06328 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
P06328 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
P06328 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
P06328 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
P06328 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
P06328 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
P06328 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
P06328 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
P06328 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
P06328 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
P06328 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
P06328 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
P06328 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
P06328 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
P06328 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
P06328 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
P06328 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
P06328 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
P06328 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
P06328 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC12.59□□□□□ -0.39
P06328 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
P06328 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC12.59□□□□□ -0.39
P06328 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC12.59□□□□□ -0.39
P06328 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
P06328 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
P06328 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
P06328 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
P06328 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
P06328 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
P06328 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
P06328 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
P06328 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
P06328 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
P06328 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC12.59□□□□□ -0.39
P06328 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
P06328 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
P06328 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
P06328 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
P06328 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
P06328 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
P06328 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.39
P06328 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
P06328 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
P06328 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
P06328 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC12.58□□□□□ -0.4
P06328 Gm6576-201ENSMUST00000169678 883 ntBASIC12.58□□□□□ -0.4
P06328 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC12.58□□□□□ -0.4
P06328 Gm3807-201ENSMUST00000193520 1168 ntBASIC12.58□□□□□ -0.4
P06328 Gm37179-201ENSMUST00000194862 823 ntBASIC12.58□□□□□ -0.4
P06328 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
P06328 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
P06328 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms