Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Tnfrsf17O88472 AC154855.1-201ENSMUST00000227353 1458 ntBASIC15.96■□□□□ 0.14
Tnfrsf17O88472 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Tnfrsf17O88472 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
Tnfrsf17O88472 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Tnfrsf17O88472 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
Tnfrsf17O88472 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Tnfrsf17O88472 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Tnfrsf17O88472 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Tnfrsf17O88472 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Tnfrsf17O88472 Gm15467-201ENSMUST00000120582 445 ntBASIC15.95■□□□□ 0.14
Tnfrsf17O88472 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC15.95■□□□□ 0.14
Tnfrsf17O88472 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC15.95■□□□□ 0.14
Tnfrsf17O88472 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC15.95■□□□□ 0.14
Tnfrsf17O88472 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Tnfrsf17O88472 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15.95■□□□□ 0.14
Tnfrsf17O88472 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC15.95■□□□□ 0.14
Tnfrsf17O88472 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Tnfrsf17O88472 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Tnfrsf17O88472 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Tnfrsf17O88472 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Tnfrsf17O88472 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Tnfrsf17O88472 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Tnfrsf17O88472 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Tnfrsf17O88472 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Tnfrsf17O88472 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Tnfrsf17O88472 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Tnfrsf17O88472 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC15.95■□□□□ 0.14
Tnfrsf17O88472 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Tnfrsf17O88472 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Tnfrsf17O88472 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Tnfrsf17O88472 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Tnfrsf17O88472 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Tnfrsf17O88472 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.94■□□□□ 0.14
Tnfrsf17O88472 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Tnfrsf17O88472 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Tnfrsf17O88472 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Tnfrsf17O88472 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Tnfrsf17O88472 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Tnfrsf17O88472 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Tnfrsf17O88472 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC15.94■□□□□ 0.14
Tnfrsf17O88472 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Tnfrsf17O88472 Gm10060-201ENSMUST00000212002 111 ntBASIC15.94■□□□□ 0.14
Tnfrsf17O88472 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Tnfrsf17O88472 AC125350.1-201ENSMUST00000225115 903 ntBASIC15.94■□□□□ 0.14
Tnfrsf17O88472 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Tnfrsf17O88472 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Tnfrsf17O88472 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Tnfrsf17O88472 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Tnfrsf17O88472 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Tnfrsf17O88472 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Tnfrsf17O88472 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Tnfrsf17O88472 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC15.94■□□□□ 0.14
Tnfrsf17O88472 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Tnfrsf17O88472 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Tnfrsf17O88472 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Tnfrsf17O88472 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Tnfrsf17O88472 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Tnfrsf17O88472 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
Tnfrsf17O88472 AC121961.1-201ENSMUST00000218594 1779 ntBASIC15.93■□□□□ 0.14
Tnfrsf17O88472 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Tnfrsf17O88472 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Tnfrsf17O88472 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC15.93■□□□□ 0.14
Tnfrsf17O88472 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Tnfrsf17O88472 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC15.93■□□□□ 0.14
Tnfrsf17O88472 Auts2-212ENSMUST00000178555 309 ntBASIC15.93■□□□□ 0.14
Tnfrsf17O88472 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC15.93■□□□□ 0.14
Tnfrsf17O88472 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC15.93■□□□□ 0.14
Tnfrsf17O88472 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Tnfrsf17O88472 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC15.93■□□□□ 0.14
Tnfrsf17O88472 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Tnfrsf17O88472 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Tnfrsf17O88472 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Tnfrsf17O88472 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Tnfrsf17O88472 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Tnfrsf17O88472 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Tnfrsf17O88472 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Tnfrsf17O88472 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Tnfrsf17O88472 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Tnfrsf17O88472 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Tnfrsf17O88472 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Tnfrsf17O88472 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Tnfrsf17O88472 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Tnfrsf17O88472 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Tnfrsf17O88472 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Tnfrsf17O88472 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC15.92■□□□□ 0.14
Tnfrsf17O88472 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC15.92■□□□□ 0.14
Tnfrsf17O88472 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC15.92■□□□□ 0.14
Tnfrsf17O88472 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Tnfrsf17O88472 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Tnfrsf17O88472 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Tnfrsf17O88472 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Tnfrsf17O88472 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Tnfrsf17O88472 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Tnfrsf17O88472 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Tnfrsf17O88472 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Tnfrsf17O88472 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Tnfrsf17O88472 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Tnfrsf17O88472 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
Tnfrsf17O88472 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms