Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Efnb3O35393 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Efnb3O35393 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Efnb3O35393 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Efnb3O35393 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Efnb3O35393 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Efnb3O35393 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Efnb3O35393 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Efnb3O35393 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Efnb3O35393 Gm16499-203ENSMUST00000204633 2177 ntBASIC13.62□□□□□ -0.23
Efnb3O35393 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Efnb3O35393 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Efnb3O35393 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Efnb3O35393 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Efnb3O35393 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Efnb3O35393 Gm26596-201ENSMUST00000180464 2655 ntBASIC13.61□□□□□ -0.23
Efnb3O35393 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC13.61□□□□□ -0.23
Efnb3O35393 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
Efnb3O35393 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Efnb3O35393 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC13.61□□□□□ -0.23
Efnb3O35393 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Efnb3O35393 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Efnb3O35393 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Efnb3O35393 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Efnb3O35393 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Efnb3O35393 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Efnb3O35393 Slc35b2-207ENSMUST00000226086 850 ntBASIC13.61□□□□□ -0.23
Efnb3O35393 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Efnb3O35393 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Efnb3O35393 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Efnb3O35393 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Efnb3O35393 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Efnb3O35393 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC13.61□□□□□ -0.23
Efnb3O35393 AC108858.1-201ENSMUST00000228461 1498 ntBASIC13.61□□□□□ -0.23
Efnb3O35393 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Efnb3O35393 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Efnb3O35393 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC13.6□□□□□ -0.23
Efnb3O35393 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Efnb3O35393 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Efnb3O35393 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Efnb3O35393 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Efnb3O35393 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Efnb3O35393 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Efnb3O35393 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Efnb3O35393 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC13.6□□□□□ -0.23
Efnb3O35393 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Efnb3O35393 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Efnb3O35393 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC13.6□□□□□ -0.23
Efnb3O35393 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Efnb3O35393 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Efnb3O35393 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Efnb3O35393 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Efnb3O35393 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Efnb3O35393 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Efnb3O35393 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Efnb3O35393 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC13.59□□□□□ -0.23
Efnb3O35393 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Efnb3O35393 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Efnb3O35393 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Efnb3O35393 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Efnb3O35393 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Efnb3O35393 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Efnb3O35393 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC13.59□□□□□ -0.23
Efnb3O35393 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC13.59□□□□□ -0.23
Efnb3O35393 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Efnb3O35393 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Efnb3O35393 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Efnb3O35393 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Efnb3O35393 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Efnb3O35393 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Efnb3O35393 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Efnb3O35393 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Efnb3O35393 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Efnb3O35393 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Efnb3O35393 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC13.59□□□□□ -0.23
Efnb3O35393 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Efnb3O35393 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Efnb3O35393 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Efnb3O35393 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Efnb3O35393 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Efnb3O35393 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Efnb3O35393 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Efnb3O35393 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Efnb3O35393 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Efnb3O35393 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC13.58□□□□□ -0.24
Efnb3O35393 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Efnb3O35393 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC13.58□□□□□ -0.24
Efnb3O35393 Gm38285-201ENSMUST00000192928 922 ntBASIC13.58□□□□□ -0.24
Efnb3O35393 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC13.58□□□□□ -0.24
Efnb3O35393 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Efnb3O35393 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Efnb3O35393 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Efnb3O35393 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Efnb3O35393 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Efnb3O35393 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Efnb3O35393 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Efnb3O35393 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Efnb3O35393 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Efnb3O35393 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Efnb3O35393 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms