Protein–RNA interactions for Protein: O35218

Cpsf2, Cleavage and polyadenylation specificity factor subunit 2, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf2O35218 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cpsf2O35218 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cpsf2O35218 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.41■□□□□ 0.54
Cpsf2O35218 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cpsf2O35218 Dio3-201ENSMUST00000097228 1449 ntBASIC18.4■□□□□ 0.54
Cpsf2O35218 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Cpsf2O35218 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cpsf2O35218 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cpsf2O35218 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
Cpsf2O35218 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cpsf2O35218 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cpsf2O35218 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cpsf2O35218 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cpsf2O35218 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cpsf2O35218 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cpsf2O35218 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cpsf2O35218 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.4■□□□□ 0.54
Cpsf2O35218 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cpsf2O35218 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.4■□□□□ 0.54
Cpsf2O35218 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cpsf2O35218 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cpsf2O35218 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cpsf2O35218 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cpsf2O35218 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cpsf2O35218 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cpsf2O35218 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cpsf2O35218 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Cpsf2O35218 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cpsf2O35218 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.4■□□□□ 0.54
Cpsf2O35218 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Cpsf2O35218 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Cpsf2O35218 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cpsf2O35218 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cpsf2O35218 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cpsf2O35218 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cpsf2O35218 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cpsf2O35218 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cpsf2O35218 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cpsf2O35218 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cpsf2O35218 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cpsf2O35218 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cpsf2O35218 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cpsf2O35218 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cpsf2O35218 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.39■□□□□ 0.53
Cpsf2O35218 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cpsf2O35218 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cpsf2O35218 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cpsf2O35218 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cpsf2O35218 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cpsf2O35218 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cpsf2O35218 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Cpsf2O35218 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Cpsf2O35218 Gm10138-203ENSMUST00000206952 366 ntBASIC18.38■□□□□ 0.53
Cpsf2O35218 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cpsf2O35218 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Cpsf2O35218 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cpsf2O35218 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cpsf2O35218 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cpsf2O35218 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cpsf2O35218 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cpsf2O35218 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Cpsf2O35218 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cpsf2O35218 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cpsf2O35218 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
Cpsf2O35218 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cpsf2O35218 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cpsf2O35218 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cpsf2O35218 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cpsf2O35218 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cpsf2O35218 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cpsf2O35218 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cpsf2O35218 Gm11249-201ENSMUST00000117071 859 ntBASIC18.37■□□□□ 0.53
Cpsf2O35218 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cpsf2O35218 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cpsf2O35218 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cpsf2O35218 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cpsf2O35218 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cpsf2O35218 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.37■□□□□ 0.53
Cpsf2O35218 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cpsf2O35218 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cpsf2O35218 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cpsf2O35218 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cpsf2O35218 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Cpsf2O35218 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Cpsf2O35218 Gm15375-201ENSMUST00000119510 849 ntBASIC18.36■□□□□ 0.53
Cpsf2O35218 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cpsf2O35218 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cpsf2O35218 Mir6349-201ENSMUST00000184059 97 ntBASIC18.36■□□□□ 0.53
Cpsf2O35218 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.36■□□□□ 0.53
Cpsf2O35218 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cpsf2O35218 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cpsf2O35218 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cpsf2O35218 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cpsf2O35218 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cpsf2O35218 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cpsf2O35218 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
Cpsf2O35218 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cpsf2O35218 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cpsf2O35218 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cpsf2O35218 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms