Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 Gm42911-201ENSMUST00000199360 1630 ntBASIC14.07□□□□□ -0.16
Nkx6-2D3Z4R4 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx6-2D3Z4R4 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx6-2D3Z4R4 Gm11841-201ENSMUST00000117060 1963 ntBASIC14.07□□□□□ -0.16
Nkx6-2D3Z4R4 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx6-2D3Z4R4 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx6-2D3Z4R4 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx6-2D3Z4R4 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.07□□□□□ -0.16
Nkx6-2D3Z4R4 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx6-2D3Z4R4 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx6-2D3Z4R4 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Nkx6-2D3Z4R4 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx6-2D3Z4R4 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx6-2D3Z4R4 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC14.06□□□□□ -0.16
Nkx6-2D3Z4R4 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx6-2D3Z4R4 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx6-2D3Z4R4 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx6-2D3Z4R4 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx6-2D3Z4R4 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx6-2D3Z4R4 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx6-2D3Z4R4 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx6-2D3Z4R4 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx6-2D3Z4R4 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx6-2D3Z4R4 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx6-2D3Z4R4 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx6-2D3Z4R4 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.06□□□□□ -0.16
Nkx6-2D3Z4R4 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.06□□□□□ -0.16
Nkx6-2D3Z4R4 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Nkx6-2D3Z4R4 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx6-2D3Z4R4 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx6-2D3Z4R4 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.06□□□□□ -0.16
Nkx6-2D3Z4R4 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx6-2D3Z4R4 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx6-2D3Z4R4 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx6-2D3Z4R4 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx6-2D3Z4R4 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx6-2D3Z4R4 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx6-2D3Z4R4 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx6-2D3Z4R4 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx6-2D3Z4R4 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx6-2D3Z4R4 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.05□□□□□ -0.16
Nkx6-2D3Z4R4 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx6-2D3Z4R4 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.05□□□□□ -0.16
Nkx6-2D3Z4R4 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx6-2D3Z4R4 Gm43759-201ENSMUST00000196925 1261 ntBASIC14.05□□□□□ -0.16
Nkx6-2D3Z4R4 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Nkx6-2D3Z4R4 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx6-2D3Z4R4 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx6-2D3Z4R4 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx6-2D3Z4R4 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Nkx6-2D3Z4R4 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx6-2D3Z4R4 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx6-2D3Z4R4 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx6-2D3Z4R4 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
Nkx6-2D3Z4R4 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx6-2D3Z4R4 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx6-2D3Z4R4 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx6-2D3Z4R4 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx6-2D3Z4R4 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx6-2D3Z4R4 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx6-2D3Z4R4 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.05□□□□□ -0.16
Nkx6-2D3Z4R4 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx6-2D3Z4R4 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx6-2D3Z4R4 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx6-2D3Z4R4 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Nkx6-2D3Z4R4 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx6-2D3Z4R4 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Nkx6-2D3Z4R4 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx6-2D3Z4R4 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx6-2D3Z4R4 Gm8839-201ENSMUST00000121279 1645 ntBASIC14.04□□□□□ -0.16
Nkx6-2D3Z4R4 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.04□□□□□ -0.16
Nkx6-2D3Z4R4 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx6-2D3Z4R4 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx6-2D3Z4R4 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Nkx6-2D3Z4R4 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC14.04□□□□□ -0.16
Nkx6-2D3Z4R4 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx6-2D3Z4R4 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx6-2D3Z4R4 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx6-2D3Z4R4 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC14.04□□□□□ -0.16
Nkx6-2D3Z4R4 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx6-2D3Z4R4 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx6-2D3Z4R4 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx6-2D3Z4R4 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx6-2D3Z4R4 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx6-2D3Z4R4 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx6-2D3Z4R4 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx6-2D3Z4R4 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx6-2D3Z4R4 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx6-2D3Z4R4 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx6-2D3Z4R4 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx6-2D3Z4R4 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx6-2D3Z4R4 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx6-2D3Z4R4 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx6-2D3Z4R4 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx6-2D3Z4R4 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx6-2D3Z4R4 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx6-2D3Z4R4 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx6-2D3Z4R4 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx6-2D3Z4R4 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Nkx6-2D3Z4R4 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms