Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
IsxA1A546 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
IsxA1A546 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
IsxA1A546 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
IsxA1A546 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
IsxA1A546 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
IsxA1A546 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.03■□□□□ 0.16
IsxA1A546 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
IsxA1A546 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
IsxA1A546 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
IsxA1A546 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.02■□□□□ 0.16
IsxA1A546 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
IsxA1A546 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.02■□□□□ 0.16
IsxA1A546 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
IsxA1A546 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
IsxA1A546 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
IsxA1A546 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
IsxA1A546 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
IsxA1A546 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
IsxA1A546 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
IsxA1A546 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
IsxA1A546 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.16
IsxA1A546 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
IsxA1A546 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.02■□□□□ 0.15
IsxA1A546 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.02■□□□□ 0.15
IsxA1A546 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
IsxA1A546 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
IsxA1A546 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.02■□□□□ 0.15
IsxA1A546 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
IsxA1A546 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
IsxA1A546 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
IsxA1A546 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
IsxA1A546 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
IsxA1A546 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
IsxA1A546 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
IsxA1A546 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
IsxA1A546 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
IsxA1A546 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
IsxA1A546 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
IsxA1A546 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC16.01■□□□□ 0.15
IsxA1A546 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC16.01■□□□□ 0.15
IsxA1A546 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
IsxA1A546 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
IsxA1A546 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
IsxA1A546 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
IsxA1A546 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
IsxA1A546 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
IsxA1A546 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
IsxA1A546 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
IsxA1A546 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
IsxA1A546 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
IsxA1A546 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
IsxA1A546 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC16■□□□□ 0.15
IsxA1A546 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
IsxA1A546 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16■□□□□ 0.15
IsxA1A546 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
IsxA1A546 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
IsxA1A546 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16■□□□□ 0.15
IsxA1A546 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
IsxA1A546 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16■□□□□ 0.15
IsxA1A546 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
IsxA1A546 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
IsxA1A546 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
IsxA1A546 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
IsxA1A546 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
IsxA1A546 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
IsxA1A546 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC16■□□□□ 0.15
IsxA1A546 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16■□□□□ 0.15
IsxA1A546 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC16■□□□□ 0.15
IsxA1A546 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
IsxA1A546 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
IsxA1A546 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16■□□□□ 0.15
IsxA1A546 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
IsxA1A546 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
IsxA1A546 Gm37812-201ENSMUST00000195216 2475 ntBASIC16■□□□□ 0.15
IsxA1A546 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
IsxA1A546 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
IsxA1A546 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
IsxA1A546 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
IsxA1A546 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
IsxA1A546 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
IsxA1A546 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
IsxA1A546 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
IsxA1A546 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
IsxA1A546 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
IsxA1A546 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC15.99■□□□□ 0.15
IsxA1A546 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
IsxA1A546 AC099934.2-201ENSMUST00000196389 70 ntBASIC15.99■□□□□ 0.15
IsxA1A546 AC156953.1-201ENSMUST00000196953 70 ntBASIC15.99■□□□□ 0.15
IsxA1A546 AC157822.2-201ENSMUST00000200291 70 ntBASIC15.99■□□□□ 0.15
IsxA1A546 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
IsxA1A546 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
IsxA1A546 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
IsxA1A546 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
IsxA1A546 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
IsxA1A546 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
IsxA1A546 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
IsxA1A546 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
IsxA1A546 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
IsxA1A546 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms