Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC11.88□□□□□ -0.51
Trav13d-4A0A0G2JFX3 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trav13d-4A0A0G2JFX3 AV356131-201ENSMUST00000206201 750 ntBASIC11.88□□□□□ -0.51
Trav13d-4A0A0G2JFX3 AC140264.2-202ENSMUST00000218746 817 ntBASIC11.88□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC11.87□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC11.87□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Gm7291-201ENSMUST00000199147 382 ntBASIC11.87□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC11.87□□□□□ -0.51
Trav13d-4A0A0G2JFX3 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC11.87□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Gm5874-201ENSMUST00000096101 508 ntBASIC11.87□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC11.87□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC11.87□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC11.87□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC11.86□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav13d-4A0A0G2JFX3 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC11.86□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav13d-4A0A0G2JFX3 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC11.86□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav13d-4A0A0G2JFX3 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trav13d-4A0A0G2JFX3 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC11.85□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC11.85□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav13d-4A0A0G2JFX3 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC11.85□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav13d-4A0A0G2JFX3 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav13d-4A0A0G2JFX3 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav13d-4A0A0G2JFX3 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms