Protein–RNA interactions for Protein: A0A0B4J1P8

Trbv13-1, T cell receptor beta, variable 13-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-1A0A0B4J1P8 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC12.84□□□□□ -0.35
Trbv13-1A0A0B4J1P8 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC12.84□□□□□ -0.35
Trbv13-1A0A0B4J1P8 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
Trbv13-1A0A0B4J1P8 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC12.84□□□□□ -0.35
Trbv13-1A0A0B4J1P8 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trbv13-1A0A0B4J1P8 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC12.84□□□□□ -0.35
Trbv13-1A0A0B4J1P8 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Trbv13-1A0A0B4J1P8 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
Trbv13-1A0A0B4J1P8 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv13-1A0A0B4J1P8 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC12.84□□□□□ -0.35
Trbv13-1A0A0B4J1P8 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC12.83□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC12.83□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC12.82□□□□□ -0.36
Trbv13-1A0A0B4J1P8 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv13-1A0A0B4J1P8 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Gm26917-202ENSMUST00000192833 3329 ntBASIC12.82□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC12.81□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Gm45560-201ENSMUST00000211492 1472 ntBASIC12.81□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC12.81□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Gm37055-201ENSMUST00000191866 133 ntBASIC12.81□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC12.81□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Gm44544-201ENSMUST00000207052 1844 ntBASIC12.81□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC12.8□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC12.8□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Gm18025-201ENSMUST00000221733 862 ntBASIC12.8□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trbv13-1A0A0B4J1P8 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms