Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav19A0A0B4J1K4 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav19A0A0B4J1K4 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav19A0A0B4J1K4 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav19A0A0B4J1K4 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav19A0A0B4J1K4 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav19A0A0B4J1K4 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav19A0A0B4J1K4 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trav19A0A0B4J1K4 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav19A0A0B4J1K4 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav19A0A0B4J1K4 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav19A0A0B4J1K4 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav19A0A0B4J1K4 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trav19A0A0B4J1K4 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav19A0A0B4J1K4 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Trav19A0A0B4J1K4 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav19A0A0B4J1K4 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav19A0A0B4J1K4 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav19A0A0B4J1K4 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav19A0A0B4J1K4 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav19A0A0B4J1K4 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav19A0A0B4J1K4 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC12.89□□□□□ -0.35
Trav19A0A0B4J1K4 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav19A0A0B4J1K4 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav19A0A0B4J1K4 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav19A0A0B4J1K4 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Trav19A0A0B4J1K4 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Trav19A0A0B4J1K4 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav19A0A0B4J1K4 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav19A0A0B4J1K4 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav19A0A0B4J1K4 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav19A0A0B4J1K4 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav19A0A0B4J1K4 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav19A0A0B4J1K4 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav19A0A0B4J1K4 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav19A0A0B4J1K4 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav19A0A0B4J1K4 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trav19A0A0B4J1K4 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav19A0A0B4J1K4 Gm2399-201ENSMUST00000104944 225 ntBASIC12.88□□□□□ -0.35
Trav19A0A0B4J1K4 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav19A0A0B4J1K4 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC12.88□□□□□ -0.35
Trav19A0A0B4J1K4 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC12.88□□□□□ -0.35
Trav19A0A0B4J1K4 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav19A0A0B4J1K4 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC12.88□□□□□ -0.35
Trav19A0A0B4J1K4 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav19A0A0B4J1K4 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav19A0A0B4J1K4 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav19A0A0B4J1K4 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav19A0A0B4J1K4 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC12.88□□□□□ -0.35
Trav19A0A0B4J1K4 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav19A0A0B4J1K4 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav19A0A0B4J1K4 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav19A0A0B4J1K4 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav19A0A0B4J1K4 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav19A0A0B4J1K4 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trav19A0A0B4J1K4 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav19A0A0B4J1K4 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav19A0A0B4J1K4 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trav19A0A0B4J1K4 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trav19A0A0B4J1K4 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav19A0A0B4J1K4 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trav19A0A0B4J1K4 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trav19A0A0B4J1K4 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Trav19A0A0B4J1K4 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav19A0A0B4J1K4 Gm45412-201ENSMUST00000210217 2275 ntBASIC12.87□□□□□ -0.35
Trav19A0A0B4J1K4 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav19A0A0B4J1K4 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav19A0A0B4J1K4 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav19A0A0B4J1K4 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav19A0A0B4J1K4 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav19A0A0B4J1K4 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav19A0A0B4J1K4 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Trav19A0A0B4J1K4 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav19A0A0B4J1K4 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC12.87□□□□□ -0.35
Trav19A0A0B4J1K4 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav19A0A0B4J1K4 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav19A0A0B4J1K4 Gm18671-201ENSMUST00000214826 683 ntBASIC12.87□□□□□ -0.35
Trav19A0A0B4J1K4 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC12.87□□□□□ -0.35
Trav19A0A0B4J1K4 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav19A0A0B4J1K4 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC12.87□□□□□ -0.35
Trav19A0A0B4J1K4 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav19A0A0B4J1K4 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav19A0A0B4J1K4 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC12.87□□□□□ -0.35
Trav19A0A0B4J1K4 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav19A0A0B4J1K4 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav19A0A0B4J1K4 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav19A0A0B4J1K4 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav19A0A0B4J1K4 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Trav19A0A0B4J1K4 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trav19A0A0B4J1K4 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav19A0A0B4J1K4 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav19A0A0B4J1K4 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav19A0A0B4J1K4 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav19A0A0B4J1K4 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav19A0A0B4J1K4 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trav19A0A0B4J1K4 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav19A0A0B4J1K4 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav19A0A0B4J1K4 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav19A0A0B4J1K4 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC12.86□□□□□ -0.35
Trav19A0A0B4J1K4 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms