Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trbc1A0A0A6YWV4 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Trbc1A0A0A6YWV4 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbc1A0A0A6YWV4 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbc1A0A0A6YWV4 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbc1A0A0A6YWV4 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbc1A0A0A6YWV4 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbc1A0A0A6YWV4 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Trbc1A0A0A6YWV4 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trbc1A0A0A6YWV4 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbc1A0A0A6YWV4 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
Trbc1A0A0A6YWV4 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Trbc1A0A0A6YWV4 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Trbc1A0A0A6YWV4 AC156016.1-201ENSMUST00000227190 1035 ntBASIC15.81■□□□□ 0.12
Trbc1A0A0A6YWV4 Odf3b-204ENSMUST00000227834 930 ntBASIC15.81■□□□□ 0.12
Trbc1A0A0A6YWV4 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbc1A0A0A6YWV4 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbc1A0A0A6YWV4 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbc1A0A0A6YWV4 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC15.81■□□□□ 0.12
Trbc1A0A0A6YWV4 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbc1A0A0A6YWV4 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Trbc1A0A0A6YWV4 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbc1A0A0A6YWV4 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trbc1A0A0A6YWV4 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trbc1A0A0A6YWV4 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trbc1A0A0A6YWV4 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbc1A0A0A6YWV4 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC15.8■□□□□ 0.12
Trbc1A0A0A6YWV4 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbc1A0A0A6YWV4 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC15.8■□□□□ 0.12
Trbc1A0A0A6YWV4 Gm43808-201ENSMUST00000202534 2065 ntBASIC15.8■□□□□ 0.12
Trbc1A0A0A6YWV4 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbc1A0A0A6YWV4 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Trbc1A0A0A6YWV4 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC15.8■□□□□ 0.12
Trbc1A0A0A6YWV4 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbc1A0A0A6YWV4 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC15.8■□□□□ 0.12
Trbc1A0A0A6YWV4 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Trbc1A0A0A6YWV4 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC15.8■□□□□ 0.12
Trbc1A0A0A6YWV4 Gm37055-201ENSMUST00000191866 133 ntBASIC15.8■□□□□ 0.12
Trbc1A0A0A6YWV4 AL672049.1-201ENSMUST00000197943 91 ntBASIC15.8■□□□□ 0.12
Trbc1A0A0A6YWV4 Gm21814-202ENSMUST00000203277 873 ntBASIC15.8■□□□□ 0.12
Trbc1A0A0A6YWV4 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trbc1A0A0A6YWV4 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Trbc1A0A0A6YWV4 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbc1A0A0A6YWV4 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.8■□□□□ 0.12
Trbc1A0A0A6YWV4 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbc1A0A0A6YWV4 Haglr-201ENSMUST00000100000 2085 ntBASIC15.8■□□□□ 0.12
Trbc1A0A0A6YWV4 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbc1A0A0A6YWV4 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbc1A0A0A6YWV4 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC15.8■□□□□ 0.12
Trbc1A0A0A6YWV4 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trbc1A0A0A6YWV4 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbc1A0A0A6YWV4 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbc1A0A0A6YWV4 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbc1A0A0A6YWV4 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trbc1A0A0A6YWV4 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbc1A0A0A6YWV4 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC15.79■□□□□ 0.12
Trbc1A0A0A6YWV4 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Trbc1A0A0A6YWV4 Mir6982-201ENSMUST00000184354 68 ntBASIC15.79■□□□□ 0.12
Trbc1A0A0A6YWV4 Gm9694-201ENSMUST00000193347 1189 ntBASIC15.79■□□□□ 0.12
Trbc1A0A0A6YWV4 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbc1A0A0A6YWV4 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbc1A0A0A6YWV4 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbc1A0A0A6YWV4 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trbc1A0A0A6YWV4 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Trbc1A0A0A6YWV4 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trbc1A0A0A6YWV4 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbc1A0A0A6YWV4 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbc1A0A0A6YWV4 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbc1A0A0A6YWV4 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbc1A0A0A6YWV4 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbc1A0A0A6YWV4 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Trbc1A0A0A6YWV4 Arhgef4-208ENSMUST00000211073 171 ntBASIC15.78■□□□□ 0.12
Trbc1A0A0A6YWV4 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trbc1A0A0A6YWV4 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbc1A0A0A6YWV4 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbc1A0A0A6YWV4 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbc1A0A0A6YWV4 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbc1A0A0A6YWV4 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbc1A0A0A6YWV4 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbc1A0A0A6YWV4 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbc1A0A0A6YWV4 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbc1A0A0A6YWV4 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbc1A0A0A6YWV4 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trbc1A0A0A6YWV4 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbc1A0A0A6YWV4 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC15.77■□□□□ 0.12
Trbc1A0A0A6YWV4 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbc1A0A0A6YWV4 Gm45774-201ENSMUST00000211992 2665 ntBASIC15.77■□□□□ 0.12
Trbc1A0A0A6YWV4 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbc1A0A0A6YWV4 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbc1A0A0A6YWV4 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbc1A0A0A6YWV4 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC15.77■□□□□ 0.12
Trbc1A0A0A6YWV4 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC15.77■□□□□ 0.12
Trbc1A0A0A6YWV4 Gm9484-201ENSMUST00000195892 1159 ntBASIC15.77■□□□□ 0.12
Trbc1A0A0A6YWV4 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbc1A0A0A6YWV4 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbc1A0A0A6YWV4 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trbc1A0A0A6YWV4 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Trbc1A0A0A6YWV4 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Trbc1A0A0A6YWV4 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Trbc1A0A0A6YWV4 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms