Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13-2A0A075B649 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13-2A0A075B649 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13-2A0A075B649 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13-2A0A075B649 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC11.61□□□□□ -0.55
Trav13-2A0A075B649 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13-2A0A075B649 Gm6420-201ENSMUST00000193885 723 ntBASIC11.61□□□□□ -0.55
Trav13-2A0A075B649 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC11.61□□□□□ -0.55
Trav13-2A0A075B649 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13-2A0A075B649 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13-2A0A075B649 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Trav13-2A0A075B649 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13-2A0A075B649 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13-2A0A075B649 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13-2A0A075B649 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13-2A0A075B649 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13-2A0A075B649 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13-2A0A075B649 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC11.61□□□□□ -0.55
Trav13-2A0A075B649 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13-2A0A075B649 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13-2A0A075B649 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Trav13-2A0A075B649 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13-2A0A075B649 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Trav13-2A0A075B649 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13-2A0A075B649 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC11.6□□□□□ -0.55
Trav13-2A0A075B649 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13-2A0A075B649 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Trav13-2A0A075B649 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Trav13-2A0A075B649 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Trav13-2A0A075B649 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC11.6□□□□□ -0.55
Trav13-2A0A075B649 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13-2A0A075B649 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13-2A0A075B649 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13-2A0A075B649 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13-2A0A075B649 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13-2A0A075B649 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC11.6□□□□□ -0.55
Trav13-2A0A075B649 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13-2A0A075B649 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13-2A0A075B649 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13-2A0A075B649 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC11.6□□□□□ -0.55
Trav13-2A0A075B649 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC11.6□□□□□ -0.55
Trav13-2A0A075B649 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Trav13-2A0A075B649 Gm21168-201ENSMUST00000199646 1096 ntBASIC11.6□□□□□ -0.55
Trav13-2A0A075B649 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Trav13-2A0A075B649 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13-2A0A075B649 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13-2A0A075B649 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13-2A0A075B649 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Trav13-2A0A075B649 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13-2A0A075B649 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13-2A0A075B649 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13-2A0A075B649 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13-2A0A075B649 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13-2A0A075B649 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13-2A0A075B649 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13-2A0A075B649 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13-2A0A075B649 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13-2A0A075B649 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13-2A0A075B649 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
Trav13-2A0A075B649 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13-2A0A075B649 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC11.59□□□□□ -0.55
Trav13-2A0A075B649 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
Trav13-2A0A075B649 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Trav13-2A0A075B649 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC11.59□□□□□ -0.55
Trav13-2A0A075B649 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Trav13-2A0A075B649 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13-2A0A075B649 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13-2A0A075B649 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13-2A0A075B649 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13-2A0A075B649 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13-2A0A075B649 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13-2A0A075B649 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13-2A0A075B649 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13-2A0A075B649 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13-2A0A075B649 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13-2A0A075B649 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13-2A0A075B649 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Trav13-2A0A075B649 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Trav13-2A0A075B649 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.55
Trav13-2A0A075B649 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Trav13-2A0A075B649 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13-2A0A075B649 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13-2A0A075B649 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13-2A0A075B649 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Trav13-2A0A075B649 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13-2A0A075B649 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13-2A0A075B649 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13-2A0A075B649 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13-2A0A075B649 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13-2A0A075B649 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13-2A0A075B649 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC11.58□□□□□ -0.56
Trav13-2A0A075B649 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13-2A0A075B649 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
Trav13-2A0A075B649 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC11.58□□□□□ -0.56
Trav13-2A0A075B649 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13-2A0A075B649 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC11.58□□□□□ -0.56
Trav13-2A0A075B649 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13-2A0A075B649 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13-2A0A075B649 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13-2A0A075B649 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms