Protein–RNA interactions for Protein: A0A075B631

Trav9n-4, T cell receptor alpha variable 9N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4A0A075B631 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9n-4A0A075B631 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9n-4A0A075B631 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
Trav9n-4A0A075B631 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9n-4A0A075B631 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9n-4A0A075B631 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9n-4A0A075B631 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trav9n-4A0A075B631 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9n-4A0A075B631 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9n-4A0A075B631 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC11.8□□□□□ -0.52
Trav9n-4A0A075B631 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9n-4A0A075B631 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9n-4A0A075B631 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9n-4A0A075B631 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9n-4A0A075B631 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9n-4A0A075B631 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9n-4A0A075B631 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9n-4A0A075B631 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9n-4A0A075B631 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9n-4A0A075B631 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Trav9n-4A0A075B631 Gm15847-201ENSMUST00000121417 1065 ntBASIC11.8□□□□□ -0.52
Trav9n-4A0A075B631 Gm44672-201ENSMUST00000206944 1098 ntBASIC11.8□□□□□ -0.52
Trav9n-4A0A075B631 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9n-4A0A075B631 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9n-4A0A075B631 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9n-4A0A075B631 Cxcl14-202ENSMUST00000224801 1467 ntBASIC11.8□□□□□ -0.52
Trav9n-4A0A075B631 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9n-4A0A075B631 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9n-4A0A075B631 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC11.8□□□□□ -0.52
Trav9n-4A0A075B631 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9n-4A0A075B631 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9n-4A0A075B631 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9n-4A0A075B631 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9n-4A0A075B631 Ptprs-211ENSMUST00000223859 5588 ntBASIC11.79□□□□□ -0.52
Trav9n-4A0A075B631 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9n-4A0A075B631 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9n-4A0A075B631 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9n-4A0A075B631 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9n-4A0A075B631 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC11.79□□□□□ -0.52
Trav9n-4A0A075B631 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC11.79□□□□□ -0.52
Trav9n-4A0A075B631 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9n-4A0A075B631 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9n-4A0A075B631 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9n-4A0A075B631 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9n-4A0A075B631 Gm37820-201ENSMUST00000194021 2147 ntBASIC11.79□□□□□ -0.52
Trav9n-4A0A075B631 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trav9n-4A0A075B631 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC11.79□□□□□ -0.52
Trav9n-4A0A075B631 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9n-4A0A075B631 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Trav9n-4A0A075B631 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9n-4A0A075B631 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9n-4A0A075B631 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trav9n-4A0A075B631 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9n-4A0A075B631 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9n-4A0A075B631 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trav9n-4A0A075B631 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9n-4A0A075B631 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9n-4A0A075B631 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trav9n-4A0A075B631 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9n-4A0A075B631 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9n-4A0A075B631 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9n-4A0A075B631 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9n-4A0A075B631 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9n-4A0A075B631 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9n-4A0A075B631 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9n-4A0A075B631 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9n-4A0A075B631 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9n-4A0A075B631 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9n-4A0A075B631 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC11.78□□□□□ -0.52
Trav9n-4A0A075B631 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9n-4A0A075B631 Gm11927-201ENSMUST00000118472 759 ntBASIC11.78□□□□□ -0.52
Trav9n-4A0A075B631 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9n-4A0A075B631 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9n-4A0A075B631 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9n-4A0A075B631 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC11.78□□□□□ -0.52
Trav9n-4A0A075B631 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9n-4A0A075B631 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trav9n-4A0A075B631 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trav9n-4A0A075B631 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trav9n-4A0A075B631 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9n-4A0A075B631 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trav9n-4A0A075B631 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9n-4A0A075B631 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9n-4A0A075B631 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9n-4A0A075B631 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9n-4A0A075B631 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Trav9n-4A0A075B631 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9n-4A0A075B631 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC11.77□□□□□ -0.52
Trav9n-4A0A075B631 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trav9n-4A0A075B631 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trav9n-4A0A075B631 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav9n-4A0A075B631 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav9n-4A0A075B631 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav9n-4A0A075B631 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trav9n-4A0A075B631 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav9n-4A0A075B631 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9n-4A0A075B631 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9n-4A0A075B631 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9n-4A0A075B631 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9n-4A0A075B631 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms