Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Trav16d-dv11A0A075B617 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Trav16d-dv11A0A075B617 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav16d-dv11A0A075B617 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Trav16d-dv11A0A075B617 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav16d-dv11A0A075B617 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav16d-dv11A0A075B617 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav16d-dv11A0A075B617 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav16d-dv11A0A075B617 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trav16d-dv11A0A075B617 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav16d-dv11A0A075B617 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav16d-dv11A0A075B617 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Trav16d-dv11A0A075B617 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav16d-dv11A0A075B617 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC12.7□□□□□ -0.38
Trav16d-dv11A0A075B617 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav16d-dv11A0A075B617 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav16d-dv11A0A075B617 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav16d-dv11A0A075B617 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC12.7□□□□□ -0.38
Trav16d-dv11A0A075B617 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav16d-dv11A0A075B617 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav16d-dv11A0A075B617 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
Trav16d-dv11A0A075B617 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC12.7□□□□□ -0.38
Trav16d-dv11A0A075B617 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav16d-dv11A0A075B617 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Trav16d-dv11A0A075B617 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
Trav16d-dv11A0A075B617 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav16d-dv11A0A075B617 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav16d-dv11A0A075B617 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav16d-dv11A0A075B617 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC12.7□□□□□ -0.38
Trav16d-dv11A0A075B617 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav16d-dv11A0A075B617 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav16d-dv11A0A075B617 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trav16d-dv11A0A075B617 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav16d-dv11A0A075B617 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav16d-dv11A0A075B617 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav16d-dv11A0A075B617 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav16d-dv11A0A075B617 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav16d-dv11A0A075B617 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav16d-dv11A0A075B617 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav16d-dv11A0A075B617 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Trav16d-dv11A0A075B617 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Trav16d-dv11A0A075B617 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav16d-dv11A0A075B617 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Trav16d-dv11A0A075B617 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav16d-dv11A0A075B617 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trav16d-dv11A0A075B617 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav16d-dv11A0A075B617 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav16d-dv11A0A075B617 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav16d-dv11A0A075B617 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav16d-dv11A0A075B617 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trav16d-dv11A0A075B617 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav16d-dv11A0A075B617 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav16d-dv11A0A075B617 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav16d-dv11A0A075B617 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav16d-dv11A0A075B617 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav16d-dv11A0A075B617 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav16d-dv11A0A075B617 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav16d-dv11A0A075B617 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav16d-dv11A0A075B617 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav16d-dv11A0A075B617 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav16d-dv11A0A075B617 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav16d-dv11A0A075B617 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav16d-dv11A0A075B617 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav16d-dv11A0A075B617 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC12.68□□□□□ -0.38
Trav16d-dv11A0A075B617 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC12.68□□□□□ -0.38
Trav16d-dv11A0A075B617 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav16d-dv11A0A075B617 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC12.68□□□□□ -0.38
Trav16d-dv11A0A075B617 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trav16d-dv11A0A075B617 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav16d-dv11A0A075B617 Gm9847-201ENSMUST00000052528 599 ntBASIC12.68□□□□□ -0.38
Trav16d-dv11A0A075B617 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trav16d-dv11A0A075B617 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav16d-dv11A0A075B617 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav16d-dv11A0A075B617 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav16d-dv11A0A075B617 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav16d-dv11A0A075B617 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav16d-dv11A0A075B617 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav16d-dv11A0A075B617 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav16d-dv11A0A075B617 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav16d-dv11A0A075B617 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav16d-dv11A0A075B617 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav16d-dv11A0A075B617 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav16d-dv11A0A075B617 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav16d-dv11A0A075B617 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav16d-dv11A0A075B617 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav16d-dv11A0A075B617 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav16d-dv11A0A075B617 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trav16d-dv11A0A075B617 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav16d-dv11A0A075B617 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trav16d-dv11A0A075B617 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav16d-dv11A0A075B617 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trav16d-dv11A0A075B617 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trav16d-dv11A0A075B617 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav16d-dv11A0A075B617 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav16d-dv11A0A075B617 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav16d-dv11A0A075B617 AC069562.2-201ENSMUST00000224644 2146 ntBASIC12.67□□□□□ -0.38
Trav16d-dv11A0A075B617 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav16d-dv11A0A075B617 Gm14117-201ENSMUST00000122417 843 ntBASIC12.67□□□□□ -0.38
Trav16d-dv11A0A075B617 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
Trav16d-dv11A0A075B617 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms