Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-6A0A075B603 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-6A0A075B603 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-6A0A075B603 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-6A0A075B603 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
Trav6-6A0A075B603 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trav6-6A0A075B603 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
Trav6-6A0A075B603 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Trav6-6A0A075B603 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Trav6-6A0A075B603 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-6A0A075B603 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-6A0A075B603 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Trav6-6A0A075B603 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-6A0A075B603 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Trav6-6A0A075B603 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC12.85□□□□□ -0.35
Trav6-6A0A075B603 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-6A0A075B603 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-6A0A075B603 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-6A0A075B603 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Trav6-6A0A075B603 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC12.85□□□□□ -0.35
Trav6-6A0A075B603 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Trav6-6A0A075B603 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-6A0A075B603 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-6A0A075B603 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-6A0A075B603 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-6A0A075B603 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC12.85□□□□□ -0.35
Trav6-6A0A075B603 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC12.85□□□□□ -0.35
Trav6-6A0A075B603 Gm42642-201ENSMUST00000200683 355 ntBASIC12.85□□□□□ -0.35
Trav6-6A0A075B603 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-6A0A075B603 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-6A0A075B603 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-6A0A075B603 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-6A0A075B603 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-6A0A075B603 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-6A0A075B603 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-6A0A075B603 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-6A0A075B603 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-6A0A075B603 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-6A0A075B603 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trav6-6A0A075B603 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-6A0A075B603 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-6A0A075B603 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-6A0A075B603 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Trav6-6A0A075B603 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-6A0A075B603 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-6A0A075B603 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-6A0A075B603 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-6A0A075B603 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Trav6-6A0A075B603 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-6A0A075B603 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-6A0A075B603 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav6-6A0A075B603 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-6A0A075B603 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-6A0A075B603 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-6A0A075B603 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
Trav6-6A0A075B603 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-6A0A075B603 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-6A0A075B603 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-6A0A075B603 Gm26596-201ENSMUST00000180464 2655 ntBASIC12.84□□□□□ -0.35
Trav6-6A0A075B603 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-6A0A075B603 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC12.84□□□□□ -0.35
Trav6-6A0A075B603 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav6-6A0A075B603 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trav6-6A0A075B603 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trav6-6A0A075B603 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Trav6-6A0A075B603 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-6A0A075B603 Gm43598-201ENSMUST00000202482 2479 ntBASIC12.84□□□□□ -0.35
Trav6-6A0A075B603 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trav6-6A0A075B603 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav6-6A0A075B603 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Trav6-6A0A075B603 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav6-6A0A075B603 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trav6-6A0A075B603 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC12.83□□□□□ -0.36
Trav6-6A0A075B603 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6-6A0A075B603 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6-6A0A075B603 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6-6A0A075B603 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Trav6-6A0A075B603 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6-6A0A075B603 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC12.83□□□□□ -0.36
Trav6-6A0A075B603 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Trav6-6A0A075B603 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC12.83□□□□□ -0.36
Trav6-6A0A075B603 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6-6A0A075B603 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6-6A0A075B603 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6-6A0A075B603 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC12.83□□□□□ -0.36
Trav6-6A0A075B603 Gm5874-201ENSMUST00000096101 508 ntBASIC12.83□□□□□ -0.36
Trav6-6A0A075B603 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC12.83□□□□□ -0.36
Trav6-6A0A075B603 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trav6-6A0A075B603 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6-6A0A075B603 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6-6A0A075B603 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6-6A0A075B603 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6-6A0A075B603 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6-6A0A075B603 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6-6A0A075B603 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trav6-6A0A075B603 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Trav6-6A0A075B603 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trav6-6A0A075B603 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-6A0A075B603 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6-6A0A075B603 Gm38345-201ENSMUST00000192635 1748 ntBASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms