Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav9-1A0A075B601 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav9-1A0A075B601 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav9-1A0A075B601 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav9-1A0A075B601 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav9-1A0A075B601 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC13.46□□□□□ -0.25
Trav9-1A0A075B601 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC13.46□□□□□ -0.25
Trav9-1A0A075B601 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Trav9-1A0A075B601 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav9-1A0A075B601 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC13.46□□□□□ -0.25
Trav9-1A0A075B601 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC13.46□□□□□ -0.25
Trav9-1A0A075B601 Gm16499-203ENSMUST00000204633 2177 ntBASIC13.46□□□□□ -0.25
Trav9-1A0A075B601 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav9-1A0A075B601 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav9-1A0A075B601 Gm43548-201ENSMUST00000197139 2353 ntBASIC13.46□□□□□ -0.25
Trav9-1A0A075B601 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav9-1A0A075B601 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC13.46□□□□□ -0.26
Trav9-1A0A075B601 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC13.46□□□□□ -0.26
Trav9-1A0A075B601 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav9-1A0A075B601 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav9-1A0A075B601 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
Trav9-1A0A075B601 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav9-1A0A075B601 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav9-1A0A075B601 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9-1A0A075B601 Gm45244-201ENSMUST00000211328 2200 ntBASIC13.45□□□□□ -0.26
Trav9-1A0A075B601 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9-1A0A075B601 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9-1A0A075B601 Gm43272-201ENSMUST00000200599 1584 ntBASIC13.45□□□□□ -0.26
Trav9-1A0A075B601 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9-1A0A075B601 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9-1A0A075B601 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9-1A0A075B601 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Trav9-1A0A075B601 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9-1A0A075B601 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Trav9-1A0A075B601 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9-1A0A075B601 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9-1A0A075B601 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9-1A0A075B601 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9-1A0A075B601 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9-1A0A075B601 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Trav9-1A0A075B601 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9-1A0A075B601 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9-1A0A075B601 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9-1A0A075B601 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9-1A0A075B601 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9-1A0A075B601 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9-1A0A075B601 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9-1A0A075B601 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9-1A0A075B601 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9-1A0A075B601 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9-1A0A075B601 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9-1A0A075B601 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9-1A0A075B601 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC13.44□□□□□ -0.26
Trav9-1A0A075B601 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Trav9-1A0A075B601 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9-1A0A075B601 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Trav9-1A0A075B601 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9-1A0A075B601 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Trav9-1A0A075B601 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9-1A0A075B601 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9-1A0A075B601 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9-1A0A075B601 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9-1A0A075B601 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Trav9-1A0A075B601 Dio3-201ENSMUST00000097228 1449 ntBASIC13.44□□□□□ -0.26
Trav9-1A0A075B601 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9-1A0A075B601 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9-1A0A075B601 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Trav9-1A0A075B601 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9-1A0A075B601 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9-1A0A075B601 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9-1A0A075B601 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav9-1A0A075B601 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Trav9-1A0A075B601 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav9-1A0A075B601 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav9-1A0A075B601 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav9-1A0A075B601 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav9-1A0A075B601 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav9-1A0A075B601 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav9-1A0A075B601 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav9-1A0A075B601 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav9-1A0A075B601 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC13.43□□□□□ -0.26
Trav9-1A0A075B601 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC13.43□□□□□ -0.26
Trav9-1A0A075B601 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav9-1A0A075B601 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav9-1A0A075B601 Gm10138-203ENSMUST00000206952 366 ntBASIC13.43□□□□□ -0.26
Trav9-1A0A075B601 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC13.43□□□□□ -0.26
Trav9-1A0A075B601 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav9-1A0A075B601 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav9-1A0A075B601 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav9-1A0A075B601 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav9-1A0A075B601 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav9-1A0A075B601 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav9-1A0A075B601 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav9-1A0A075B601 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Trav9-1A0A075B601 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav9-1A0A075B601 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Trav9-1A0A075B601 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav9-1A0A075B601 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav9-1A0A075B601 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trav9-1A0A075B601 Gm45560-201ENSMUST00000211492 1472 ntBASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms