Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-1A0A075B5Z8 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-1A0A075B5Z8 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-1A0A075B5Z8 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-1A0A075B5Z8 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-1A0A075B5Z8 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-1A0A075B5Z8 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav6-1A0A075B5Z8 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-1A0A075B5Z8 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-1A0A075B5Z8 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-1A0A075B5Z8 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-1A0A075B5Z8 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC13.84□□□□□ -0.19
Trav6-1A0A075B5Z8 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-1A0A075B5Z8 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-1A0A075B5Z8 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-1A0A075B5Z8 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-1A0A075B5Z8 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-1A0A075B5Z8 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trav6-1A0A075B5Z8 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC13.84□□□□□ -0.19
Trav6-1A0A075B5Z8 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-1A0A075B5Z8 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-1A0A075B5Z8 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
Trav6-1A0A075B5Z8 Mir6349-201ENSMUST00000184059 97 ntBASIC13.84□□□□□ -0.19
Trav6-1A0A075B5Z8 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Trav6-1A0A075B5Z8 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC13.84□□□□□ -0.19
Trav6-1A0A075B5Z8 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-1A0A075B5Z8 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Trav6-1A0A075B5Z8 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-1A0A075B5Z8 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-1A0A075B5Z8 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-1A0A075B5Z8 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC13.84□□□□□ -0.19
Trav6-1A0A075B5Z8 Gm26596-201ENSMUST00000180464 2655 ntBASIC13.84□□□□□ -0.19
Trav6-1A0A075B5Z8 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav6-1A0A075B5Z8 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav6-1A0A075B5Z8 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Trav6-1A0A075B5Z8 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav6-1A0A075B5Z8 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav6-1A0A075B5Z8 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6-1A0A075B5Z8 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6-1A0A075B5Z8 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Trav6-1A0A075B5Z8 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6-1A0A075B5Z8 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6-1A0A075B5Z8 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Trav6-1A0A075B5Z8 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6-1A0A075B5Z8 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC13.83□□□□□ -0.2
Trav6-1A0A075B5Z8 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trav6-1A0A075B5Z8 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6-1A0A075B5Z8 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6-1A0A075B5Z8 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC13.83□□□□□ -0.2
Trav6-1A0A075B5Z8 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC13.83□□□□□ -0.2
Trav6-1A0A075B5Z8 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6-1A0A075B5Z8 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6-1A0A075B5Z8 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6-1A0A075B5Z8 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6-1A0A075B5Z8 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6-1A0A075B5Z8 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Trav6-1A0A075B5Z8 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6-1A0A075B5Z8 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6-1A0A075B5Z8 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6-1A0A075B5Z8 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6-1A0A075B5Z8 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6-1A0A075B5Z8 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6-1A0A075B5Z8 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6-1A0A075B5Z8 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC13.83□□□□□ -0.2
Trav6-1A0A075B5Z8 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6-1A0A075B5Z8 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC13.82□□□□□ -0.2
Trav6-1A0A075B5Z8 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6-1A0A075B5Z8 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
Trav6-1A0A075B5Z8 Gm20628-201ENSMUST00000177363 3215 ntBASIC13.82□□□□□ -0.2
Trav6-1A0A075B5Z8 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6-1A0A075B5Z8 Gm11927-201ENSMUST00000118472 759 ntBASIC13.82□□□□□ -0.2
Trav6-1A0A075B5Z8 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6-1A0A075B5Z8 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC13.82□□□□□ -0.2
Trav6-1A0A075B5Z8 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6-1A0A075B5Z8 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6-1A0A075B5Z8 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Trav6-1A0A075B5Z8 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6-1A0A075B5Z8 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6-1A0A075B5Z8 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6-1A0A075B5Z8 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6-1A0A075B5Z8 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6-1A0A075B5Z8 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC13.82□□□□□ -0.2
Trav6-1A0A075B5Z8 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6-1A0A075B5Z8 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6-1A0A075B5Z8 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6-1A0A075B5Z8 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Trav6-1A0A075B5Z8 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-1A0A075B5Z8 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-1A0A075B5Z8 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-1A0A075B5Z8 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-1A0A075B5Z8 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-1A0A075B5Z8 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-1A0A075B5Z8 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-1A0A075B5Z8 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC13.81□□□□□ -0.2
Trav6-1A0A075B5Z8 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-1A0A075B5Z8 Gm26524-201ENSMUST00000192339 390 ntBASIC13.81□□□□□ -0.2
Trav6-1A0A075B5Z8 Gm42555-201ENSMUST00000199304 1039 ntBASIC13.81□□□□□ -0.2
Trav6-1A0A075B5Z8 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-1A0A075B5Z8 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-1A0A075B5Z8 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms