Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 AC122428.3-201ENSMUST00000215551 2290 ntBASIC18.21■□□□□ 0.51
CcsQ9WU84 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CcsQ9WU84 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
CcsQ9WU84 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.2■□□□□ 0.5
CcsQ9WU84 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
CcsQ9WU84 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CcsQ9WU84 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CcsQ9WU84 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CcsQ9WU84 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CcsQ9WU84 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CcsQ9WU84 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC18.19■□□□□ 0.5
CcsQ9WU84 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CcsQ9WU84 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CcsQ9WU84 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC18.18■□□□□ 0.5
CcsQ9WU84 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CcsQ9WU84 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CcsQ9WU84 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CcsQ9WU84 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CcsQ9WU84 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CcsQ9WU84 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
CcsQ9WU84 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CcsQ9WU84 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CcsQ9WU84 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CcsQ9WU84 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
CcsQ9WU84 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC18.14■□□□□ 0.5
CcsQ9WU84 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
CcsQ9WU84 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CcsQ9WU84 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC18.14■□□□□ 0.49
CcsQ9WU84 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CcsQ9WU84 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CcsQ9WU84 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CcsQ9WU84 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CcsQ9WU84 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CcsQ9WU84 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CcsQ9WU84 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CcsQ9WU84 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CcsQ9WU84 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CcsQ9WU84 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CcsQ9WU84 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CcsQ9WU84 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CcsQ9WU84 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CcsQ9WU84 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC18.12■□□□□ 0.49
CcsQ9WU84 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
CcsQ9WU84 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CcsQ9WU84 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CcsQ9WU84 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CcsQ9WU84 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CcsQ9WU84 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CcsQ9WU84 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CcsQ9WU84 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CcsQ9WU84 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CcsQ9WU84 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CcsQ9WU84 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CcsQ9WU84 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC18.1■□□□□ 0.49
CcsQ9WU84 Tdp2-203ENSMUST00000223804 1136 ntBASIC18.1■□□□□ 0.49
CcsQ9WU84 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CcsQ9WU84 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CcsQ9WU84 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CcsQ9WU84 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CcsQ9WU84 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CcsQ9WU84 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.49
CcsQ9WU84 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
CcsQ9WU84 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
CcsQ9WU84 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CcsQ9WU84 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CcsQ9WU84 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CcsQ9WU84 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CcsQ9WU84 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.06■□□□□ 0.48
CcsQ9WU84 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CcsQ9WU84 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CcsQ9WU84 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
CcsQ9WU84 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CcsQ9WU84 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CcsQ9WU84 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CcsQ9WU84 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CcsQ9WU84 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CcsQ9WU84 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CcsQ9WU84 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.04■□□□□ 0.48
CcsQ9WU84 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CcsQ9WU84 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CcsQ9WU84 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CcsQ9WU84 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CcsQ9WU84 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CcsQ9WU84 Gm6345-201ENSMUST00000180378 1691 ntBASIC18.03■□□□□ 0.48
CcsQ9WU84 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CcsQ9WU84 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC18.03■□□□□ 0.48
CcsQ9WU84 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC18.03■□□□□ 0.48
CcsQ9WU84 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CcsQ9WU84 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CcsQ9WU84 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CcsQ9WU84 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CcsQ9WU84 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CcsQ9WU84 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CcsQ9WU84 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
CcsQ9WU84 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CcsQ9WU84 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18■□□□□ 0.47
CcsQ9WU84 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CcsQ9WU84 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC18■□□□□ 0.47
CcsQ9WU84 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
CcsQ9WU84 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms