Protein–RNA interactions for Protein: Q9EQ52

Vmn1r48, Vomeronasal type-1 receptor 48, mousemouse

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r48Q9EQ52 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vmn1r48Q9EQ52 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.52■□□□□ 0.88
Vmn1r48Q9EQ52 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vmn1r48Q9EQ52 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.52■□□□□ 0.88
Vmn1r48Q9EQ52 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Vmn1r48Q9EQ52 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vmn1r48Q9EQ52 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vmn1r48Q9EQ52 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vmn1r48Q9EQ52 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vmn1r48Q9EQ52 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vmn1r48Q9EQ52 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Vmn1r48Q9EQ52 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vmn1r48Q9EQ52 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vmn1r48Q9EQ52 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vmn1r48Q9EQ52 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Vmn1r48Q9EQ52 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vmn1r48Q9EQ52 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vmn1r48Q9EQ52 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vmn1r48Q9EQ52 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Vmn1r48Q9EQ52 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vmn1r48Q9EQ52 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Vmn1r48Q9EQ52 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vmn1r48Q9EQ52 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
Vmn1r48Q9EQ52 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Vmn1r48Q9EQ52 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Vmn1r48Q9EQ52 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Vmn1r48Q9EQ52 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Vmn1r48Q9EQ52 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Vmn1r48Q9EQ52 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Vmn1r48Q9EQ52 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Vmn1r48Q9EQ52 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Vmn1r48Q9EQ52 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.42■□□□□ 0.86
Vmn1r48Q9EQ52 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Vmn1r48Q9EQ52 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.42■□□□□ 0.86
Vmn1r48Q9EQ52 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vmn1r48Q9EQ52 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vmn1r48Q9EQ52 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vmn1r48Q9EQ52 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vmn1r48Q9EQ52 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vmn1r48Q9EQ52 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vmn1r48Q9EQ52 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Vmn1r48Q9EQ52 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Vmn1r48Q9EQ52 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Vmn1r48Q9EQ52 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Vmn1r48Q9EQ52 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Vmn1r48Q9EQ52 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Vmn1r48Q9EQ52 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Vmn1r48Q9EQ52 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Vmn1r48Q9EQ52 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Vmn1r48Q9EQ52 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Vmn1r48Q9EQ52 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Vmn1r48Q9EQ52 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Vmn1r48Q9EQ52 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Vmn1r48Q9EQ52 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.36■□□□□ 0.85
Vmn1r48Q9EQ52 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Vmn1r48Q9EQ52 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.35■□□□□ 0.85
Vmn1r48Q9EQ52 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vmn1r48Q9EQ52 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vmn1r48Q9EQ52 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Vmn1r48Q9EQ52 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vmn1r48Q9EQ52 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Vmn1r48Q9EQ52 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vmn1r48Q9EQ52 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Vmn1r48Q9EQ52 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Vmn1r48Q9EQ52 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Vmn1r48Q9EQ52 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Vmn1r48Q9EQ52 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vmn1r48Q9EQ52 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vmn1r48Q9EQ52 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Vmn1r48Q9EQ52 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vmn1r48Q9EQ52 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vmn1r48Q9EQ52 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Vmn1r48Q9EQ52 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vmn1r48Q9EQ52 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vmn1r48Q9EQ52 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vmn1r48Q9EQ52 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC20.3■□□□□ 0.84
Vmn1r48Q9EQ52 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
Vmn1r48Q9EQ52 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vmn1r48Q9EQ52 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vmn1r48Q9EQ52 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Vmn1r48Q9EQ52 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vmn1r48Q9EQ52 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vmn1r48Q9EQ52 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vmn1r48Q9EQ52 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vmn1r48Q9EQ52 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vmn1r48Q9EQ52 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vmn1r48Q9EQ52 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Vmn1r48Q9EQ52 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Vmn1r48Q9EQ52 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vmn1r48Q9EQ52 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vmn1r48Q9EQ52 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Vmn1r48Q9EQ52 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Vmn1r48Q9EQ52 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Vmn1r48Q9EQ52 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vmn1r48Q9EQ52 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Vmn1r48Q9EQ52 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vmn1r48Q9EQ52 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vmn1r48Q9EQ52 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vmn1r48Q9EQ52 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Vmn1r48Q9EQ52 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms