Protein–RNA interactions for Protein: Q99N57

Raf1, RAF proto-oncogene serine/threonine-protein kinase, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raf1Q99N57 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Raf1Q99N57 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Raf1Q99N57 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Raf1Q99N57 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Raf1Q99N57 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Raf1Q99N57 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Raf1Q99N57 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Raf1Q99N57 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Raf1Q99N57 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Raf1Q99N57 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Raf1Q99N57 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Raf1Q99N57 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Raf1Q99N57 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Raf1Q99N57 Gm5987-201ENSMUST00000196433 1151 ntBASIC21.18■□□□□ 0.98
Raf1Q99N57 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC21.18■□□□□ 0.98
Raf1Q99N57 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Raf1Q99N57 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Raf1Q99N57 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.17■□□□□ 0.98
Raf1Q99N57 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Raf1Q99N57 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Raf1Q99N57 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Raf1Q99N57 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Raf1Q99N57 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
Raf1Q99N57 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Raf1Q99N57 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC21.14■□□□□ 0.97
Raf1Q99N57 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Raf1Q99N57 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Raf1Q99N57 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Raf1Q99N57 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Raf1Q99N57 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.13■□□□□ 0.97
Raf1Q99N57 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Raf1Q99N57 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Raf1Q99N57 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Raf1Q99N57 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Raf1Q99N57 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Raf1Q99N57 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Raf1Q99N57 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Raf1Q99N57 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Raf1Q99N57 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Raf1Q99N57 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Raf1Q99N57 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC21.11■□□□□ 0.97
Raf1Q99N57 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Raf1Q99N57 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Raf1Q99N57 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Raf1Q99N57 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Raf1Q99N57 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.1■□□□□ 0.97
Raf1Q99N57 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.09■□□□□ 0.97
Raf1Q99N57 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Raf1Q99N57 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Raf1Q99N57 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Raf1Q99N57 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.09■□□□□ 0.97
Raf1Q99N57 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Raf1Q99N57 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC21.08■□□□□ 0.97
Raf1Q99N57 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Raf1Q99N57 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Raf1Q99N57 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Raf1Q99N57 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Raf1Q99N57 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Raf1Q99N57 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.06■□□□□ 0.96
Raf1Q99N57 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Raf1Q99N57 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.06■□□□□ 0.96
Raf1Q99N57 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Raf1Q99N57 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Raf1Q99N57 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Raf1Q99N57 Gm24970-201ENSMUST00000175582 82 ntBASIC21.05■□□□□ 0.96
Raf1Q99N57 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Raf1Q99N57 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Raf1Q99N57 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Raf1Q99N57 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Raf1Q99N57 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Raf1Q99N57 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Raf1Q99N57 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Raf1Q99N57 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Raf1Q99N57 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Raf1Q99N57 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Raf1Q99N57 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Raf1Q99N57 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Raf1Q99N57 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Raf1Q99N57 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Raf1Q99N57 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC21.01■□□□□ 0.95
Raf1Q99N57 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
Raf1Q99N57 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21■□□□□ 0.95
Raf1Q99N57 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Raf1Q99N57 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Raf1Q99N57 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Raf1Q99N57 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Raf1Q99N57 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Raf1Q99N57 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Raf1Q99N57 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.97■□□□□ 0.95
Raf1Q99N57 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Raf1Q99N57 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Raf1Q99N57 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.95
Raf1Q99N57 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
Raf1Q99N57 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Raf1Q99N57 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC20.95■□□□□ 0.94
Raf1Q99N57 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.94■□□□□ 0.94
Raf1Q99N57 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Raf1Q99N57 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Raf1Q99N57 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC20.93■□□□□ 0.94
Raf1Q99N57 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms