Protein–RNA interactions for Protein: Q99MJ6

Pdzd3, Na(+)/H(+) exchange regulatory cofactor NHE-RF4, mousemouse

Predictions only

Length 498 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzd3Q99MJ6 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC25,65■■□□□ 1,7
Pdzd3Q99MJ6 Gm9806-201ENSMUST00000051080 552 ntBASIC25,64■■□□□ 1,7
Pdzd3Q99MJ6 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC25,64■■□□□ 1,69
Pdzd3Q99MJ6 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC25,64■■□□□ 1,69
Pdzd3Q99MJ6 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC25,63■■□□□ 1,69
Pdzd3Q99MJ6 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC25,63■■□□□ 1,69
Pdzd3Q99MJ6 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC25,62■■□□□ 1,69
Pdzd3Q99MJ6 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC25,61■■□□□ 1,69
Pdzd3Q99MJ6 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC25,61■■□□□ 1,69
Pdzd3Q99MJ6 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC25,61■■□□□ 1,69
Pdzd3Q99MJ6 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC25,6■■□□□ 1,69
Pdzd3Q99MJ6 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC25,6■■□□□ 1,69
Pdzd3Q99MJ6 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC25,6■■□□□ 1,69
Pdzd3Q99MJ6 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC25,59■■□□□ 1,69
Pdzd3Q99MJ6 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC25,59■■□□□ 1,69
Pdzd3Q99MJ6 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC25,58■■□□□ 1,69
Pdzd3Q99MJ6 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC25,58■■□□□ 1,69
Pdzd3Q99MJ6 Gm16437-201ENSMUST00000025669 507 ntBASIC25,58■■□□□ 1,69
Pdzd3Q99MJ6 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC25,58■■□□□ 1,69
Pdzd3Q99MJ6 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC25,58■■□□□ 1,68
Pdzd3Q99MJ6 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC25,57■■□□□ 1,68
Pdzd3Q99MJ6 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC25,57■■□□□ 1,68
Pdzd3Q99MJ6 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC25,57■■□□□ 1,68
Pdzd3Q99MJ6 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC25,56■■□□□ 1,68
Pdzd3Q99MJ6 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC25,56■■□□□ 1,68
Pdzd3Q99MJ6 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC25,56■■□□□ 1,68
Pdzd3Q99MJ6 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC25,56■■□□□ 1,68
Pdzd3Q99MJ6 Gm27502-201ENSMUST00000183495 199 ntBASIC25,56■■□□□ 1,68
Pdzd3Q99MJ6 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC25,56■■□□□ 1,68
Pdzd3Q99MJ6 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC25,56■■□□□ 1,68
Pdzd3Q99MJ6 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC25,55■■□□□ 1,68
Pdzd3Q99MJ6 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC25,54■■□□□ 1,68
Pdzd3Q99MJ6 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC25,54■■□□□ 1,68
Pdzd3Q99MJ6 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC25,54■■□□□ 1,68
Pdzd3Q99MJ6 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC25,53■■□□□ 1,68
Pdzd3Q99MJ6 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC25,53■■□□□ 1,68
Pdzd3Q99MJ6 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC25,52■■□□□ 1,68
Pdzd3Q99MJ6 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC25,51■■□□□ 1,67
Pdzd3Q99MJ6 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC25,51■■□□□ 1,67
Pdzd3Q99MJ6 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25,51■■□□□ 1,67
Pdzd3Q99MJ6 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC25,5■■□□□ 1,67
Pdzd3Q99MJ6 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC25,5■■□□□ 1,67
Pdzd3Q99MJ6 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC25,5■■□□□ 1,67
Pdzd3Q99MJ6 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC25,49■■□□□ 1,67
Pdzd3Q99MJ6 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC25,49■■□□□ 1,67
Pdzd3Q99MJ6 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC25,48■■□□□ 1,67
Pdzd3Q99MJ6 Gm15546-201ENSMUST00000122095 826 ntBASIC25,47■■□□□ 1,67
Pdzd3Q99MJ6 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC25,47■■□□□ 1,67
Pdzd3Q99MJ6 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC25,46■■□□□ 1,67
Pdzd3Q99MJ6 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC25,46■■□□□ 1,67
Pdzd3Q99MJ6 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC25,45■■□□□ 1,67
Pdzd3Q99MJ6 Gm5297-201ENSMUST00000198555 1171 ntBASIC25,45■■□□□ 1,66
Pdzd3Q99MJ6 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC25,44■■□□□ 1,66
Pdzd3Q99MJ6 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC25,44■■□□□ 1,66
Pdzd3Q99MJ6 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC25,44■■□□□ 1,66
Pdzd3Q99MJ6 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC25,44■■□□□ 1,66
Pdzd3Q99MJ6 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC25,43■■□□□ 1,66
Pdzd3Q99MJ6 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC25,43■■□□□ 1,66
Pdzd3Q99MJ6 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC25,4■■□□□ 1,66
Pdzd3Q99MJ6 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC25,4■■□□□ 1,66
Pdzd3Q99MJ6 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC25,4■■□□□ 1,66
Pdzd3Q99MJ6 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC25,4■■□□□ 1,66
Pdzd3Q99MJ6 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC25,38■■□□□ 1,65
Pdzd3Q99MJ6 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC25,38■■□□□ 1,65
Pdzd3Q99MJ6 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC25,38■■□□□ 1,65
Pdzd3Q99MJ6 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC25,37■■□□□ 1,65
Pdzd3Q99MJ6 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC25,37■■□□□ 1,65
Pdzd3Q99MJ6 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC25,36■■□□□ 1,65
Pdzd3Q99MJ6 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC25,36■■□□□ 1,65
Pdzd3Q99MJ6 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC25,35■■□□□ 1,65
Pdzd3Q99MJ6 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC25,34■■□□□ 1,65
Pdzd3Q99MJ6 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC25,34■■□□□ 1,65
Pdzd3Q99MJ6 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC25,34■■□□□ 1,65
Pdzd3Q99MJ6 Serp2-204ENSMUST00000228055 705 ntBASIC25,34■■□□□ 1,65
Pdzd3Q99MJ6 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC25,34■■□□□ 1,65
Pdzd3Q99MJ6 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC25,34■■□□□ 1,65
Pdzd3Q99MJ6 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC25,33■■□□□ 1,65
Pdzd3Q99MJ6 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC25,33■■□□□ 1,65
Pdzd3Q99MJ6 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC25,33■■□□□ 1,65
Pdzd3Q99MJ6 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC25,33■■□□□ 1,64
Pdzd3Q99MJ6 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC25,32■■□□□ 1,64
Pdzd3Q99MJ6 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC25,31■■□□□ 1,64
Pdzd3Q99MJ6 Gm5067-201ENSMUST00000170449 1009 ntBASIC25,31■■□□□ 1,64
Pdzd3Q99MJ6 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25,3■■□□□ 1,64
Pdzd3Q99MJ6 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC25,3■■□□□ 1,64
Pdzd3Q99MJ6 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC25,3■■□□□ 1,64
Pdzd3Q99MJ6 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC25,3■■□□□ 1,64
Pdzd3Q99MJ6 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC25,29■■□□□ 1,64
Pdzd3Q99MJ6 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC25,27■■□□□ 1,64
Pdzd3Q99MJ6 Gm30346-201ENSMUST00000218641 1699 ntBASIC25,27■■□□□ 1,64
Pdzd3Q99MJ6 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC25,27■■□□□ 1,64
Pdzd3Q99MJ6 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC25,27■■□□□ 1,64
Pdzd3Q99MJ6 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC25,26■■□□□ 1,63
Pdzd3Q99MJ6 Gm5921-201ENSMUST00000075898 882 ntBASIC25,26■■□□□ 1,63
Pdzd3Q99MJ6 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC25,26■■□□□ 1,63
Pdzd3Q99MJ6 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC25,25■■□□□ 1,63
Pdzd3Q99MJ6 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC25,25■■□□□ 1,63
Pdzd3Q99MJ6 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC25,25■■□□□ 1,63
Pdzd3Q99MJ6 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC25,24■■□□□ 1,63
Pdzd3Q99MJ6 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC25,24■■□□□ 1,63
Retrieved 100 of 76,532 protein–RNA pairs in 37,8 ms