Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Pcdhb6Q91XZ4 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Pcdhb6Q91XZ4 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Pcdhb6Q91XZ4 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC24.74■■□□□ 1.55
Pcdhb6Q91XZ4 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
Pcdhb6Q91XZ4 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Pcdhb6Q91XZ4 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Pcdhb6Q91XZ4 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
Pcdhb6Q91XZ4 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC24.71■■□□□ 1.55
Pcdhb6Q91XZ4 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Pcdhb6Q91XZ4 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Pcdhb6Q91XZ4 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
Pcdhb6Q91XZ4 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC24.7■■□□□ 1.54
Pcdhb6Q91XZ4 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC24.7■■□□□ 1.54
Pcdhb6Q91XZ4 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Pcdhb6Q91XZ4 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Pcdhb6Q91XZ4 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC24.67■■□□□ 1.54
Pcdhb6Q91XZ4 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Pcdhb6Q91XZ4 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
Pcdhb6Q91XZ4 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Pcdhb6Q91XZ4 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Pcdhb6Q91XZ4 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
Pcdhb6Q91XZ4 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.54
Pcdhb6Q91XZ4 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
Pcdhb6Q91XZ4 Gm30023-201ENSMUST00000197970 889 ntBASIC24.64■■□□□ 1.54
Pcdhb6Q91XZ4 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
Pcdhb6Q91XZ4 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC24.63■■□□□ 1.53
Pcdhb6Q91XZ4 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Pcdhb6Q91XZ4 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC24.63■■□□□ 1.53
Pcdhb6Q91XZ4 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Pcdhb6Q91XZ4 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Pcdhb6Q91XZ4 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Pcdhb6Q91XZ4 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Pcdhb6Q91XZ4 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Pcdhb6Q91XZ4 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Pcdhb6Q91XZ4 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC24.6■■□□□ 1.53
Pcdhb6Q91XZ4 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Pcdhb6Q91XZ4 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Pcdhb6Q91XZ4 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
Pcdhb6Q91XZ4 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC24.6■■□□□ 1.53
Pcdhb6Q91XZ4 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Pcdhb6Q91XZ4 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC24.59■■□□□ 1.53
Pcdhb6Q91XZ4 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Pcdhb6Q91XZ4 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
Pcdhb6Q91XZ4 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Pcdhb6Q91XZ4 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Pcdhb6Q91XZ4 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
Pcdhb6Q91XZ4 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
Pcdhb6Q91XZ4 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
Pcdhb6Q91XZ4 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Pcdhb6Q91XZ4 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Pcdhb6Q91XZ4 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
Pcdhb6Q91XZ4 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC24.56■■□□□ 1.52
Pcdhb6Q91XZ4 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC24.56■■□□□ 1.52
Pcdhb6Q91XZ4 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Pcdhb6Q91XZ4 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Pcdhb6Q91XZ4 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC24.55■■□□□ 1.52
Pcdhb6Q91XZ4 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Pcdhb6Q91XZ4 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
Pcdhb6Q91XZ4 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Pcdhb6Q91XZ4 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Pcdhb6Q91XZ4 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Pcdhb6Q91XZ4 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
Pcdhb6Q91XZ4 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Pcdhb6Q91XZ4 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Pcdhb6Q91XZ4 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
Pcdhb6Q91XZ4 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Pcdhb6Q91XZ4 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC24.51■■□□□ 1.51
Pcdhb6Q91XZ4 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Pcdhb6Q91XZ4 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Pcdhb6Q91XZ4 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC24.5■■□□□ 1.51
Pcdhb6Q91XZ4 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC24.5■■□□□ 1.51
Pcdhb6Q91XZ4 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Pcdhb6Q91XZ4 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
Pcdhb6Q91XZ4 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Pcdhb6Q91XZ4 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC24.48■■□□□ 1.51
Pcdhb6Q91XZ4 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC24.48■■□□□ 1.51
Pcdhb6Q91XZ4 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
Pcdhb6Q91XZ4 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Pcdhb6Q91XZ4 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Pcdhb6Q91XZ4 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC24.47■■□□□ 1.51
Pcdhb6Q91XZ4 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Pcdhb6Q91XZ4 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Pcdhb6Q91XZ4 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Pcdhb6Q91XZ4 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Pcdhb6Q91XZ4 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Pcdhb6Q91XZ4 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC24.45■■□□□ 1.5
Pcdhb6Q91XZ4 Gm42809-201ENSMUST00000198429 1138 ntBASIC24.45■■□□□ 1.5
Pcdhb6Q91XZ4 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Pcdhb6Q91XZ4 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Pcdhb6Q91XZ4 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Pcdhb6Q91XZ4 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
Pcdhb6Q91XZ4 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
Pcdhb6Q91XZ4 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Pcdhb6Q91XZ4 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Pcdhb6Q91XZ4 Nkain2-201ENSMUST00000092602 558 ntBASIC24.42■■□□□ 1.5
Pcdhb6Q91XZ4 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Pcdhb6Q91XZ4 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC24.41■■□□□ 1.5
Pcdhb6Q91XZ4 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Pcdhb6Q91XZ4 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC24.4■■□□□ 1.5
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms