Protein–RNA interactions for Protein: Q8VI88

Odf4, Outer dense fiber protein 4, mousemouse

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Odf4Q8VI88 Gm30346-201ENSMUST00000218641 1699 ntBASIC21.03■□□□□ 0.96
Odf4Q8VI88 Gm5987-201ENSMUST00000196433 1151 ntBASIC21.03■□□□□ 0.96
Odf4Q8VI88 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Odf4Q8VI88 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Odf4Q8VI88 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Odf4Q8VI88 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.01■□□□□ 0.95
Odf4Q8VI88 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Odf4Q8VI88 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Odf4Q8VI88 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21■□□□□ 0.95
Odf4Q8VI88 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21■□□□□ 0.95
Odf4Q8VI88 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Odf4Q8VI88 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Odf4Q8VI88 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.97■□□□□ 0.95
Odf4Q8VI88 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Odf4Q8VI88 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Odf4Q8VI88 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Odf4Q8VI88 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.95■□□□□ 0.94
Odf4Q8VI88 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Odf4Q8VI88 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Odf4Q8VI88 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Odf4Q8VI88 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Odf4Q8VI88 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Odf4Q8VI88 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.94■□□□□ 0.94
Odf4Q8VI88 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Odf4Q8VI88 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Odf4Q8VI88 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Odf4Q8VI88 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Odf4Q8VI88 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.93■□□□□ 0.94
Odf4Q8VI88 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Odf4Q8VI88 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Odf4Q8VI88 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Odf4Q8VI88 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.92■□□□□ 0.94
Odf4Q8VI88 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Odf4Q8VI88 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Odf4Q8VI88 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Odf4Q8VI88 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
Odf4Q8VI88 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Odf4Q8VI88 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Odf4Q8VI88 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
Odf4Q8VI88 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Odf4Q8VI88 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.89■□□□□ 0.93
Odf4Q8VI88 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Odf4Q8VI88 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Odf4Q8VI88 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Odf4Q8VI88 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Odf4Q8VI88 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Odf4Q8VI88 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Odf4Q8VI88 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Odf4Q8VI88 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Odf4Q8VI88 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Odf4Q8VI88 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.86■□□□□ 0.93
Odf4Q8VI88 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.86■□□□□ 0.93
Odf4Q8VI88 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Odf4Q8VI88 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Odf4Q8VI88 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Odf4Q8VI88 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Odf4Q8VI88 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Odf4Q8VI88 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Odf4Q8VI88 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.85■□□□□ 0.93
Odf4Q8VI88 Nkain2-201ENSMUST00000092602 558 ntBASIC20.85■□□□□ 0.93
Odf4Q8VI88 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Odf4Q8VI88 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Odf4Q8VI88 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.84■□□□□ 0.93
Odf4Q8VI88 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Odf4Q8VI88 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Odf4Q8VI88 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.83■□□□□ 0.93
Odf4Q8VI88 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Odf4Q8VI88 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Odf4Q8VI88 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Odf4Q8VI88 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Odf4Q8VI88 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Odf4Q8VI88 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Odf4Q8VI88 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Odf4Q8VI88 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Odf4Q8VI88 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Odf4Q8VI88 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Odf4Q8VI88 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Odf4Q8VI88 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Odf4Q8VI88 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Odf4Q8VI88 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Odf4Q8VI88 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Odf4Q8VI88 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Odf4Q8VI88 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Odf4Q8VI88 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Odf4Q8VI88 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Odf4Q8VI88 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Odf4Q8VI88 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
Odf4Q8VI88 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Odf4Q8VI88 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Odf4Q8VI88 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Odf4Q8VI88 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Odf4Q8VI88 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Odf4Q8VI88 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.75■□□□□ 0.91
Odf4Q8VI88 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Odf4Q8VI88 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Odf4Q8VI88 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Odf4Q8VI88 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Odf4Q8VI88 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.73■□□□□ 0.91
Odf4Q8VI88 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Odf4Q8VI88 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 10.3 ms