Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
Ddx39aQ8VDW0 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Ddx39aQ8VDW0 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC26.89■■□□□ 1.9
Ddx39aQ8VDW0 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC26.89■■□□□ 1.9
Ddx39aQ8VDW0 Zxda-201ENSMUST00000117281 2621 ntBASIC26.88■■□□□ 1.89
Ddx39aQ8VDW0 Pcf11-205ENSMUST00000208255 1720 ntBASIC26.88■■□□□ 1.89
Ddx39aQ8VDW0 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Ddx39aQ8VDW0 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Ddx39aQ8VDW0 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Ddx39aQ8VDW0 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Ddx39aQ8VDW0 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
Ddx39aQ8VDW0 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
Ddx39aQ8VDW0 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Ddx39aQ8VDW0 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC26.82■■□□□ 1.88
Ddx39aQ8VDW0 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Ddx39aQ8VDW0 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Ddx39aQ8VDW0 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Ddx39aQ8VDW0 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Ddx39aQ8VDW0 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Ddx39aQ8VDW0 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Ddx39aQ8VDW0 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Ddx39aQ8VDW0 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Ddx39aQ8VDW0 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Ddx39aQ8VDW0 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC26.79■■□□□ 1.88
Ddx39aQ8VDW0 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Ddx39aQ8VDW0 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC26.78■■□□□ 1.88
Ddx39aQ8VDW0 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC26.78■■□□□ 1.88
Ddx39aQ8VDW0 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Ddx39aQ8VDW0 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Ddx39aQ8VDW0 AC131739.1-201ENSMUST00000221692 1245 ntBASIC26.74■■□□□ 1.87
Ddx39aQ8VDW0 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC26.73■■□□□ 1.87
Ddx39aQ8VDW0 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC26.73■■□□□ 1.87
Ddx39aQ8VDW0 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC26.73■■□□□ 1.87
Ddx39aQ8VDW0 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
Ddx39aQ8VDW0 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Ddx39aQ8VDW0 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC26.69■■□□□ 1.86
Ddx39aQ8VDW0 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Ddx39aQ8VDW0 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC26.69■■□□□ 1.86
Ddx39aQ8VDW0 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC26.69■■□□□ 1.86
Ddx39aQ8VDW0 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Ddx39aQ8VDW0 Gm43445-201ENSMUST00000198564 2091 ntBASIC26.69■■□□□ 1.86
Ddx39aQ8VDW0 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
Ddx39aQ8VDW0 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Ddx39aQ8VDW0 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC26.67■■□□□ 1.86
Ddx39aQ8VDW0 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC26.67■■□□□ 1.86
Ddx39aQ8VDW0 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC26.67■■□□□ 1.86
Ddx39aQ8VDW0 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Ddx39aQ8VDW0 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC26.66■■□□□ 1.86
Ddx39aQ8VDW0 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC26.66■■□□□ 1.86
Ddx39aQ8VDW0 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Ddx39aQ8VDW0 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Ddx39aQ8VDW0 Particl-201ENSMUST00000205370 1560 ntBASIC26.65■■□□□ 1.86
Ddx39aQ8VDW0 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC26.64■■□□□ 1.86
Ddx39aQ8VDW0 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Ddx39aQ8VDW0 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Ddx39aQ8VDW0 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC26.64■■□□□ 1.85
Ddx39aQ8VDW0 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Ddx39aQ8VDW0 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC26.61■■□□□ 1.85
Ddx39aQ8VDW0 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
Ddx39aQ8VDW0 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC26.61■■□□□ 1.85
Ddx39aQ8VDW0 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
Ddx39aQ8VDW0 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Ddx39aQ8VDW0 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Ddx39aQ8VDW0 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC26.6■■□□□ 1.85
Ddx39aQ8VDW0 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
Ddx39aQ8VDW0 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Ddx39aQ8VDW0 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Ddx39aQ8VDW0 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Ddx39aQ8VDW0 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Ddx39aQ8VDW0 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC26.58■■□□□ 1.85
Ddx39aQ8VDW0 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Ddx39aQ8VDW0 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
Ddx39aQ8VDW0 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
Ddx39aQ8VDW0 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Ddx39aQ8VDW0 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Ddx39aQ8VDW0 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Ddx39aQ8VDW0 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
Ddx39aQ8VDW0 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC26.53■■□□□ 1.84
Ddx39aQ8VDW0 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Ddx39aQ8VDW0 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Ddx39aQ8VDW0 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
Ddx39aQ8VDW0 Gm6206-201ENSMUST00000133472 2199 ntBASIC26.49■■□□□ 1.83
Ddx39aQ8VDW0 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
Ddx39aQ8VDW0 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Ddx39aQ8VDW0 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
Ddx39aQ8VDW0 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Ddx39aQ8VDW0 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Ddx39aQ8VDW0 AC167019.3-201ENSMUST00000228225 1266 ntBASIC26.48■■□□□ 1.83
Ddx39aQ8VDW0 Gm6311-201ENSMUST00000073790 878 ntBASIC26.48■■□□□ 1.83
Ddx39aQ8VDW0 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
Ddx39aQ8VDW0 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC26.48■■□□□ 1.83
Ddx39aQ8VDW0 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Ddx39aQ8VDW0 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Ddx39aQ8VDW0 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Ddx39aQ8VDW0 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC26.47■■□□□ 1.83
Ddx39aQ8VDW0 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Ddx39aQ8VDW0 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Ddx39aQ8VDW0 Gm11175-201ENSMUST00000116172 543 ntBASIC26.45■■□□□ 1.82
Ddx39aQ8VDW0 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC26.44■■□□□ 1.82
Ddx39aQ8VDW0 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms