Protein–RNA interactions for Protein: Q8K3A2

Trpt1, tRNA 2'-phosphotransferase 1, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpt1Q8K3A2 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trpt1Q8K3A2 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trpt1Q8K3A2 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trpt1Q8K3A2 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trpt1Q8K3A2 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trpt1Q8K3A2 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trpt1Q8K3A2 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trpt1Q8K3A2 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trpt1Q8K3A2 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Trpt1Q8K3A2 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trpt1Q8K3A2 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
Trpt1Q8K3A2 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC18.3■□□□□ 0.52
Trpt1Q8K3A2 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trpt1Q8K3A2 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trpt1Q8K3A2 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trpt1Q8K3A2 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trpt1Q8K3A2 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trpt1Q8K3A2 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trpt1Q8K3A2 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Trpt1Q8K3A2 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trpt1Q8K3A2 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trpt1Q8K3A2 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trpt1Q8K3A2 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Trpt1Q8K3A2 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trpt1Q8K3A2 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trpt1Q8K3A2 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trpt1Q8K3A2 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trpt1Q8K3A2 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trpt1Q8K3A2 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC18.25■□□□□ 0.51
Trpt1Q8K3A2 Zfp131-205ENSMUST00000223812 663 ntBASIC18.25■□□□□ 0.51
Trpt1Q8K3A2 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trpt1Q8K3A2 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trpt1Q8K3A2 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trpt1Q8K3A2 AC153890.1-201ENSMUST00000220021 2469 ntBASIC18.25■□□□□ 0.51
Trpt1Q8K3A2 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC18.24■□□□□ 0.51
Trpt1Q8K3A2 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC18.24■□□□□ 0.51
Trpt1Q8K3A2 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trpt1Q8K3A2 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trpt1Q8K3A2 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC18.23■□□□□ 0.51
Trpt1Q8K3A2 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trpt1Q8K3A2 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trpt1Q8K3A2 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trpt1Q8K3A2 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Trpt1Q8K3A2 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Trpt1Q8K3A2 Pcf11-205ENSMUST00000208255 1720 ntBASIC18.21■□□□□ 0.51
Trpt1Q8K3A2 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trpt1Q8K3A2 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC18.2■□□□□ 0.5
Trpt1Q8K3A2 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trpt1Q8K3A2 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trpt1Q8K3A2 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trpt1Q8K3A2 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trpt1Q8K3A2 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trpt1Q8K3A2 Gm43863-201ENSMUST00000203822 1192 ntBASIC18.18■□□□□ 0.5
Trpt1Q8K3A2 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC18.18■□□□□ 0.5
Trpt1Q8K3A2 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Trpt1Q8K3A2 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Trpt1Q8K3A2 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trpt1Q8K3A2 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trpt1Q8K3A2 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC18.16■□□□□ 0.5
Trpt1Q8K3A2 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC18.16■□□□□ 0.5
Trpt1Q8K3A2 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trpt1Q8K3A2 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Trpt1Q8K3A2 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trpt1Q8K3A2 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.15■□□□□ 0.5
Trpt1Q8K3A2 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trpt1Q8K3A2 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Trpt1Q8K3A2 Gm9397-201ENSMUST00000200125 605 ntBASIC18.15■□□□□ 0.5
Trpt1Q8K3A2 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trpt1Q8K3A2 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trpt1Q8K3A2 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC18.14■□□□□ 0.49
Trpt1Q8K3A2 Tdp2-203ENSMUST00000223804 1136 ntBASIC18.14■□□□□ 0.49
Trpt1Q8K3A2 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trpt1Q8K3A2 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trpt1Q8K3A2 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trpt1Q8K3A2 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trpt1Q8K3A2 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC18.13■□□□□ 0.49
Trpt1Q8K3A2 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trpt1Q8K3A2 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trpt1Q8K3A2 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC18.12■□□□□ 0.49
Trpt1Q8K3A2 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Trpt1Q8K3A2 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Trpt1Q8K3A2 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trpt1Q8K3A2 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC18.11■□□□□ 0.49
Trpt1Q8K3A2 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC18.11■□□□□ 0.49
Trpt1Q8K3A2 AC157572.2-201ENSMUST00000226970 908 ntBASIC18.11■□□□□ 0.49
Trpt1Q8K3A2 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trpt1Q8K3A2 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Trpt1Q8K3A2 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trpt1Q8K3A2 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Trpt1Q8K3A2 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trpt1Q8K3A2 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Trpt1Q8K3A2 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trpt1Q8K3A2 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trpt1Q8K3A2 Gm24970-201ENSMUST00000175582 82 ntBASIC18.09■□□□□ 0.49
Trpt1Q8K3A2 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trpt1Q8K3A2 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trpt1Q8K3A2 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Trpt1Q8K3A2 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trpt1Q8K3A2 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.48
Trpt1Q8K3A2 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 10.7 ms