Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC29.84■■■□□ 2.37
Smc4Q8CG47 Gm43445-201ENSMUST00000198564 2091 ntBASIC29.83■■■□□ 2.37
Smc4Q8CG47 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC29.83■■■□□ 2.37
Smc4Q8CG47 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC29.82■■■□□ 2.36
Smc4Q8CG47 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC29.81■■■□□ 2.36
Smc4Q8CG47 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Smc4Q8CG47 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC29.81■■■□□ 2.36
Smc4Q8CG47 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Smc4Q8CG47 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Smc4Q8CG47 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC29.79■■■□□ 2.36
Smc4Q8CG47 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC29.79■■■□□ 2.36
Smc4Q8CG47 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC29.79■■■□□ 2.36
Smc4Q8CG47 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
Smc4Q8CG47 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC29.79■■■□□ 2.36
Smc4Q8CG47 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC29.78■■■□□ 2.36
Smc4Q8CG47 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Smc4Q8CG47 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Smc4Q8CG47 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
Smc4Q8CG47 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
Smc4Q8CG47 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
Smc4Q8CG47 Gm11599-201ENSMUST00000118720 878 ntBASIC29.76■■■□□ 2.35
Smc4Q8CG47 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
Smc4Q8CG47 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC29.75■■■□□ 2.35
Smc4Q8CG47 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
Smc4Q8CG47 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC29.74■■■□□ 2.35
Smc4Q8CG47 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC29.74■■■□□ 2.35
Smc4Q8CG47 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
Smc4Q8CG47 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Smc4Q8CG47 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Smc4Q8CG47 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
Smc4Q8CG47 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Smc4Q8CG47 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
Smc4Q8CG47 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Smc4Q8CG47 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC29.69■■■□□ 2.34
Smc4Q8CG47 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Smc4Q8CG47 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC29.68■■■□□ 2.34
Smc4Q8CG47 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC29.66■■■□□ 2.34
Smc4Q8CG47 AC131739.1-201ENSMUST00000221692 1245 ntBASIC29.65■■■□□ 2.34
Smc4Q8CG47 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC29.65■■■□□ 2.34
Smc4Q8CG47 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC29.64■■■□□ 2.34
Smc4Q8CG47 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC29.64■■■□□ 2.34
Smc4Q8CG47 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC29.64■■■□□ 2.34
Smc4Q8CG47 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
Smc4Q8CG47 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
Smc4Q8CG47 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC29.63■■■□□ 2.33
Smc4Q8CG47 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Smc4Q8CG47 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Smc4Q8CG47 Gm9905-201ENSMUST00000065740 1845 ntBASIC29.62■■■□□ 2.33
Smc4Q8CG47 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Smc4Q8CG47 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
Smc4Q8CG47 Particl-201ENSMUST00000205370 1560 ntBASIC29.6■■■□□ 2.33
Smc4Q8CG47 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
Smc4Q8CG47 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
Smc4Q8CG47 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Smc4Q8CG47 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC29.58■■■□□ 2.33
Smc4Q8CG47 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC29.57■■■□□ 2.32
Smc4Q8CG47 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Smc4Q8CG47 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC29.57■■■□□ 2.32
Smc4Q8CG47 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Smc4Q8CG47 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Smc4Q8CG47 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC29.56■■■□□ 2.32
Smc4Q8CG47 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Smc4Q8CG47 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC29.56■■■□□ 2.32
Smc4Q8CG47 Gm6206-201ENSMUST00000133472 2199 ntBASIC29.56■■■□□ 2.32
Smc4Q8CG47 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC29.54■■■□□ 2.32
Smc4Q8CG47 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC29.53■■■□□ 2.32
Smc4Q8CG47 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC29.52■■■□□ 2.32
Smc4Q8CG47 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC29.52■■■□□ 2.32
Smc4Q8CG47 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.32
Smc4Q8CG47 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
Smc4Q8CG47 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
Smc4Q8CG47 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC29.47■■■□□ 2.31
Smc4Q8CG47 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
Smc4Q8CG47 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC29.45■■■□□ 2.31
Smc4Q8CG47 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
Smc4Q8CG47 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC29.45■■■□□ 2.31
Smc4Q8CG47 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Smc4Q8CG47 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC29.44■■■□□ 2.3
Smc4Q8CG47 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Smc4Q8CG47 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC29.43■■■□□ 2.3
Smc4Q8CG47 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC29.43■■■□□ 2.3
Smc4Q8CG47 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC29.42■■■□□ 2.3
Smc4Q8CG47 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Smc4Q8CG47 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
Smc4Q8CG47 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC29.41■■■□□ 2.3
Smc4Q8CG47 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC29.4■■■□□ 2.3
Smc4Q8CG47 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
Smc4Q8CG47 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Smc4Q8CG47 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC29.38■■■□□ 2.29
Smc4Q8CG47 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Smc4Q8CG47 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
Smc4Q8CG47 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Smc4Q8CG47 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC29.35■■■□□ 2.29
Smc4Q8CG47 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC29.35■■■□□ 2.29
Smc4Q8CG47 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC29.34■■■□□ 2.29
Smc4Q8CG47 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Smc4Q8CG47 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
Smc4Q8CG47 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Smc4Q8CG47 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC29.33■■■□□ 2.29
Smc4Q8CG47 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms