Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
Rft1Q8C3B8 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21■□□□□ 0.95
Rft1Q8C3B8 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rft1Q8C3B8 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21■□□□□ 0.95
Rft1Q8C3B8 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rft1Q8C3B8 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rft1Q8C3B8 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rft1Q8C3B8 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Rft1Q8C3B8 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20.98■□□□□ 0.95
Rft1Q8C3B8 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.98■□□□□ 0.95
Rft1Q8C3B8 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rft1Q8C3B8 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rft1Q8C3B8 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rft1Q8C3B8 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rft1Q8C3B8 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rft1Q8C3B8 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Rft1Q8C3B8 Gm24970-201ENSMUST00000175582 82 ntBASIC20.97■□□□□ 0.95
Rft1Q8C3B8 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rft1Q8C3B8 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rft1Q8C3B8 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Rft1Q8C3B8 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Rft1Q8C3B8 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Rft1Q8C3B8 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Rft1Q8C3B8 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.95■□□□□ 0.94
Rft1Q8C3B8 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
Rft1Q8C3B8 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rft1Q8C3B8 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rft1Q8C3B8 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
Rft1Q8C3B8 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rft1Q8C3B8 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rft1Q8C3B8 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.91■□□□□ 0.94
Rft1Q8C3B8 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rft1Q8C3B8 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rft1Q8C3B8 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rft1Q8C3B8 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Rft1Q8C3B8 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Rft1Q8C3B8 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Rft1Q8C3B8 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Rft1Q8C3B8 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Rft1Q8C3B8 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rft1Q8C3B8 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rft1Q8C3B8 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Rft1Q8C3B8 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Rft1Q8C3B8 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.89■□□□□ 0.93
Rft1Q8C3B8 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Rft1Q8C3B8 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rft1Q8C3B8 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.87■□□□□ 0.93
Rft1Q8C3B8 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rft1Q8C3B8 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rft1Q8C3B8 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rft1Q8C3B8 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Rft1Q8C3B8 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rft1Q8C3B8 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Rft1Q8C3B8 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rft1Q8C3B8 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rft1Q8C3B8 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rft1Q8C3B8 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rft1Q8C3B8 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rft1Q8C3B8 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rft1Q8C3B8 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rft1Q8C3B8 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.85■□□□□ 0.93
Rft1Q8C3B8 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rft1Q8C3B8 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rft1Q8C3B8 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20.84■□□□□ 0.93
Rft1Q8C3B8 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.84■□□□□ 0.93
Rft1Q8C3B8 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rft1Q8C3B8 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rft1Q8C3B8 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rft1Q8C3B8 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rft1Q8C3B8 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rft1Q8C3B8 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rft1Q8C3B8 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rft1Q8C3B8 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rft1Q8C3B8 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rft1Q8C3B8 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.81■□□□□ 0.92
Rft1Q8C3B8 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rft1Q8C3B8 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Rft1Q8C3B8 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rft1Q8C3B8 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rft1Q8C3B8 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rft1Q8C3B8 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rft1Q8C3B8 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rft1Q8C3B8 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Rft1Q8C3B8 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Rft1Q8C3B8 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Rft1Q8C3B8 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
Rft1Q8C3B8 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rft1Q8C3B8 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.79■□□□□ 0.92
Rft1Q8C3B8 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rft1Q8C3B8 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rft1Q8C3B8 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rft1Q8C3B8 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rft1Q8C3B8 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
Rft1Q8C3B8 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Rft1Q8C3B8 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Rft1Q8C3B8 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rft1Q8C3B8 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.76■□□□□ 0.91
Rft1Q8C3B8 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rft1Q8C3B8 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.76■□□□□ 0.91
Rft1Q8C3B8 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms