Protein–RNA interactions for Protein: Q8BSQ9

Pbrm1, Protein polybromo-1, mousemouse

Known RBP Predictions only

Length 1,634 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pbrm1Q8BSQ9 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC39.46■■■■□ 3.91
Pbrm1Q8BSQ9 Gm12366-201ENSMUST00000121722 873 ntBASIC39.46■■■■□ 3.91
Pbrm1Q8BSQ9 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC39.46■■■■□ 3.91
Pbrm1Q8BSQ9 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC39.46■■■■□ 3.91
Pbrm1Q8BSQ9 Gm5786-201ENSMUST00000085368 882 ntBASIC39.46■■■■□ 3.91
Pbrm1Q8BSQ9 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC39.45■■■■□ 3.91
Pbrm1Q8BSQ9 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC39.44■■■■□ 3.9
Pbrm1Q8BSQ9 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC39.44■■■■□ 3.9
Pbrm1Q8BSQ9 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC39.44■■■■□ 3.9
Pbrm1Q8BSQ9 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC39.44■■■■□ 3.9
Pbrm1Q8BSQ9 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC39.43■■■■□ 3.9
Pbrm1Q8BSQ9 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC39.43■■■■□ 3.9
Pbrm1Q8BSQ9 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC39.43■■■■□ 3.9
Pbrm1Q8BSQ9 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC39.42■■■■□ 3.9
Pbrm1Q8BSQ9 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC39.41■■■■□ 3.9
Pbrm1Q8BSQ9 Gm30023-201ENSMUST00000197970 889 ntBASIC39.41■■■■□ 3.9
Pbrm1Q8BSQ9 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC39.4■■■■□ 3.9
Pbrm1Q8BSQ9 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC39.39■■■■□ 3.9
Pbrm1Q8BSQ9 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC39.39■■■■□ 3.9
Pbrm1Q8BSQ9 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC39.38■■■■□ 3.89
Pbrm1Q8BSQ9 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC39.36■■■■□ 3.89
Pbrm1Q8BSQ9 Gm11687-201ENSMUST00000118911 886 ntBASIC39.35■■■■□ 3.89
Pbrm1Q8BSQ9 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC39.35■■■■□ 3.89
Pbrm1Q8BSQ9 Scarna2-201ENSMUST00000157560 414 ntBASIC39.34■■■■□ 3.89
Pbrm1Q8BSQ9 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC39.33■■■■□ 3.89
Pbrm1Q8BSQ9 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC39.33■■■■□ 3.89
Pbrm1Q8BSQ9 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC39.33■■■■□ 3.89
Pbrm1Q8BSQ9 Gm9806-201ENSMUST00000051080 552 ntBASIC39.32■■■■□ 3.89
Pbrm1Q8BSQ9 Gm4799-201ENSMUST00000095396 657 ntBASIC39.32■■■■□ 3.89
Pbrm1Q8BSQ9 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC39.32■■■■□ 3.89
Pbrm1Q8BSQ9 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC39.32■■■■□ 3.88
Pbrm1Q8BSQ9 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC39.31■■■■□ 3.88
Pbrm1Q8BSQ9 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC39.3■■■■□ 3.88
Pbrm1Q8BSQ9 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC39.3■■■■□ 3.88
Pbrm1Q8BSQ9 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC39.29■■■■□ 3.88
Pbrm1Q8BSQ9 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC39.29■■■■□ 3.88
Pbrm1Q8BSQ9 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC39.28■■■■□ 3.88
Pbrm1Q8BSQ9 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC39.28■■■■□ 3.88
Pbrm1Q8BSQ9 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC39.27■■■■□ 3.88
Pbrm1Q8BSQ9 Gm6658-202ENSMUST00000209493 1885 ntBASIC39.27■■■■□ 3.88
Pbrm1Q8BSQ9 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC39.26■■■■□ 3.88
Pbrm1Q8BSQ9 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC39.25■■■■□ 3.87
Pbrm1Q8BSQ9 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC39.25■■■■□ 3.87
Pbrm1Q8BSQ9 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC39.25■■■■□ 3.87
Pbrm1Q8BSQ9 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC39.23■■■■□ 3.87
Pbrm1Q8BSQ9 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC39.22■■■■□ 3.87
Pbrm1Q8BSQ9 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC39.22■■■■□ 3.87
Pbrm1Q8BSQ9 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC39.22■■■■□ 3.87
Pbrm1Q8BSQ9 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC39.21■■■■□ 3.87
Pbrm1Q8BSQ9 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC39.21■■■■□ 3.87
Pbrm1Q8BSQ9 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC39.21■■■■□ 3.87
Pbrm1Q8BSQ9 Pkd1-207ENSMUST00000228550 1050 ntBASIC39.21■■■■□ 3.87
Pbrm1Q8BSQ9 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC39.19■■■■□ 3.86
Pbrm1Q8BSQ9 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC39.18■■■■□ 3.86
Pbrm1Q8BSQ9 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC39.17■■■■□ 3.86
Pbrm1Q8BSQ9 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC39.17■■■■□ 3.86
Pbrm1Q8BSQ9 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC39.14■■■■□ 3.86
Pbrm1Q8BSQ9 AC154454.1-201ENSMUST00000225253 216 ntBASIC39.14■■■■□ 3.86
Pbrm1Q8BSQ9 Gm45364-201ENSMUST00000210883 159 ntBASIC39.12■■■■□ 3.85
Pbrm1Q8BSQ9 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC39.11■■■■□ 3.85
Pbrm1Q8BSQ9 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC39.11■■■■□ 3.85
Pbrm1Q8BSQ9 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC39.11■■■■□ 3.85
Pbrm1Q8BSQ9 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC39.1■■■■□ 3.85
Pbrm1Q8BSQ9 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC39.1■■■■□ 3.85
Pbrm1Q8BSQ9 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC39.1■■■■□ 3.85
Pbrm1Q8BSQ9 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC39.09■■■■□ 3.85
Pbrm1Q8BSQ9 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC39.09■■■■□ 3.85
Pbrm1Q8BSQ9 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC39.08■■■■□ 3.85
Pbrm1Q8BSQ9 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC39.07■■■■□ 3.84
Pbrm1Q8BSQ9 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC39.07■■■■□ 3.84
Pbrm1Q8BSQ9 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC39.06■■■■□ 3.84
Pbrm1Q8BSQ9 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC39.05■■■■□ 3.84
Pbrm1Q8BSQ9 Gm27502-201ENSMUST00000183495 199 ntBASIC39.05■■■■□ 3.84
Pbrm1Q8BSQ9 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC39.05■■■■□ 3.84
Pbrm1Q8BSQ9 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC39.03■■■■□ 3.84
Pbrm1Q8BSQ9 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC39.02■■■■□ 3.84
Pbrm1Q8BSQ9 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC39.01■■■■□ 3.83
Pbrm1Q8BSQ9 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC39■■■■□ 3.83
Pbrm1Q8BSQ9 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC39■■■■□ 3.83
Pbrm1Q8BSQ9 Gm7332-201ENSMUST00000118351 454 ntBASIC39■■■■□ 3.83
Pbrm1Q8BSQ9 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC38.99■■■■□ 3.83
Pbrm1Q8BSQ9 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC38.99■■■■□ 3.83
Pbrm1Q8BSQ9 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC38.99■■■■□ 3.83
Pbrm1Q8BSQ9 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC38.99■■■■□ 3.83
Pbrm1Q8BSQ9 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC38.96■■■■□ 3.83
Pbrm1Q8BSQ9 Gm16437-201ENSMUST00000025669 507 ntBASIC38.96■■■■□ 3.83
Pbrm1Q8BSQ9 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC38.95■■■■□ 3.83
Pbrm1Q8BSQ9 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC38.94■■■■□ 3.82
Pbrm1Q8BSQ9 Pcf11-205ENSMUST00000208255 1720 ntBASIC38.94■■■■□ 3.82
Pbrm1Q8BSQ9 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC38.93■■■■□ 3.82
Pbrm1Q8BSQ9 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC38.93■■■■□ 3.82
Pbrm1Q8BSQ9 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC38.93■■■■□ 3.82
Pbrm1Q8BSQ9 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC38.92■■■■□ 3.82
Pbrm1Q8BSQ9 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC38.92■■■■□ 3.82
Pbrm1Q8BSQ9 Mir3960-201ENSMUST00000198213 73 ntBASIC38.92■■■■□ 3.82
Pbrm1Q8BSQ9 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC38.92■■■■□ 3.82
Pbrm1Q8BSQ9 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC38.9■■■■□ 3.82
Pbrm1Q8BSQ9 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC38.88■■■■□ 3.82
Pbrm1Q8BSQ9 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC38.87■■■■□ 3.81
Pbrm1Q8BSQ9 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC38.85■■■■□ 3.81
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms