Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC23.14■■□□□ 1.3
Pcdh20Q8BIZ0 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
Pcdh20Q8BIZ0 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Pcdh20Q8BIZ0 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Pcdh20Q8BIZ0 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Pcdh20Q8BIZ0 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Pcdh20Q8BIZ0 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Pcdh20Q8BIZ0 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Pcdh20Q8BIZ0 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Pcdh20Q8BIZ0 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Pcdh20Q8BIZ0 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Pcdh20Q8BIZ0 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC23.11■■□□□ 1.29
Pcdh20Q8BIZ0 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Pcdh20Q8BIZ0 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Pcdh20Q8BIZ0 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC23.1■■□□□ 1.29
Pcdh20Q8BIZ0 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC23.09■■□□□ 1.29
Pcdh20Q8BIZ0 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Pcdh20Q8BIZ0 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Pcdh20Q8BIZ0 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Pcdh20Q8BIZ0 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Pcdh20Q8BIZ0 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Pcdh20Q8BIZ0 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Pcdh20Q8BIZ0 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC23.08■■□□□ 1.29
Pcdh20Q8BIZ0 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Pcdh20Q8BIZ0 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Pcdh20Q8BIZ0 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Pcdh20Q8BIZ0 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Pcdh20Q8BIZ0 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Pcdh20Q8BIZ0 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Pcdh20Q8BIZ0 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Pcdh20Q8BIZ0 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Pcdh20Q8BIZ0 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Pcdh20Q8BIZ0 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC23.03■■□□□ 1.28
Pcdh20Q8BIZ0 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Pcdh20Q8BIZ0 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Pcdh20Q8BIZ0 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Pcdh20Q8BIZ0 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC23.03■■□□□ 1.28
Pcdh20Q8BIZ0 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Pcdh20Q8BIZ0 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Pcdh20Q8BIZ0 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Pcdh20Q8BIZ0 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC23.02■■□□□ 1.28
Pcdh20Q8BIZ0 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Pcdh20Q8BIZ0 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC23■■□□□ 1.27
Pcdh20Q8BIZ0 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC22.99■■□□□ 1.27
Pcdh20Q8BIZ0 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
Pcdh20Q8BIZ0 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Pcdh20Q8BIZ0 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Pcdh20Q8BIZ0 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC22.98■■□□□ 1.27
Pcdh20Q8BIZ0 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Pcdh20Q8BIZ0 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Pcdh20Q8BIZ0 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC22.97■■□□□ 1.27
Pcdh20Q8BIZ0 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Pcdh20Q8BIZ0 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pcdh20Q8BIZ0 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.27
Pcdh20Q8BIZ0 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Pcdh20Q8BIZ0 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Pcdh20Q8BIZ0 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
Pcdh20Q8BIZ0 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Pcdh20Q8BIZ0 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Pcdh20Q8BIZ0 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
Pcdh20Q8BIZ0 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC22.93■■□□□ 1.26
Pcdh20Q8BIZ0 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Pcdh20Q8BIZ0 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Pcdh20Q8BIZ0 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Pcdh20Q8BIZ0 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
Pcdh20Q8BIZ0 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.26
Pcdh20Q8BIZ0 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC22.89■■□□□ 1.26
Pcdh20Q8BIZ0 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.26
Pcdh20Q8BIZ0 Gm9939-201ENSMUST00000067161 1154 ntBASIC22.88■■□□□ 1.25
Pcdh20Q8BIZ0 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Pcdh20Q8BIZ0 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.88■■□□□ 1.25
Pcdh20Q8BIZ0 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
Pcdh20Q8BIZ0 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
Pcdh20Q8BIZ0 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Pcdh20Q8BIZ0 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pcdh20Q8BIZ0 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Pcdh20Q8BIZ0 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Pcdh20Q8BIZ0 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
Pcdh20Q8BIZ0 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC22.83■■□□□ 1.25
Pcdh20Q8BIZ0 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Pcdh20Q8BIZ0 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
Pcdh20Q8BIZ0 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pcdh20Q8BIZ0 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC22.82■■□□□ 1.24
Pcdh20Q8BIZ0 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pcdh20Q8BIZ0 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Pcdh20Q8BIZ0 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Pcdh20Q8BIZ0 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Pcdh20Q8BIZ0 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC22.81■■□□□ 1.24
Pcdh20Q8BIZ0 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Pcdh20Q8BIZ0 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC22.81■■□□□ 1.24
Pcdh20Q8BIZ0 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Pcdh20Q8BIZ0 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC22.8■■□□□ 1.24
Pcdh20Q8BIZ0 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Pcdh20Q8BIZ0 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Pcdh20Q8BIZ0 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Pcdh20Q8BIZ0 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Pcdh20Q8BIZ0 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Pcdh20Q8BIZ0 Gm6821-201ENSMUST00000107540 542 ntBASIC22.77■■□□□ 1.24
Pcdh20Q8BIZ0 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Pcdh20Q8BIZ0 Gm8503-201ENSMUST00000118131 455 ntBASIC22.77■■□□□ 1.24
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms