Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Ttc28Q80XJ3 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ttc28Q80XJ3 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Ttc28Q80XJ3 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ttc28Q80XJ3 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ttc28Q80XJ3 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ttc28Q80XJ3 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ttc28Q80XJ3 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.75■□□□□ 0.91
Ttc28Q80XJ3 Gm12366-201ENSMUST00000121722 873 ntBASIC20.75■□□□□ 0.91
Ttc28Q80XJ3 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.75■□□□□ 0.91
Ttc28Q80XJ3 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.75■□□□□ 0.91
Ttc28Q80XJ3 Gm5786-201ENSMUST00000085368 882 ntBASIC20.75■□□□□ 0.91
Ttc28Q80XJ3 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ttc28Q80XJ3 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ttc28Q80XJ3 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ttc28Q80XJ3 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.73■□□□□ 0.91
Ttc28Q80XJ3 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ttc28Q80XJ3 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ttc28Q80XJ3 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
Ttc28Q80XJ3 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ttc28Q80XJ3 Particl-201ENSMUST00000205370 1560 ntBASIC20.71■□□□□ 0.91
Ttc28Q80XJ3 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ttc28Q80XJ3 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ttc28Q80XJ3 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ttc28Q80XJ3 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ttc28Q80XJ3 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ttc28Q80XJ3 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Ttc28Q80XJ3 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ttc28Q80XJ3 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ttc28Q80XJ3 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.68■□□□□ 0.9
Ttc28Q80XJ3 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ttc28Q80XJ3 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.67■□□□□ 0.9
Ttc28Q80XJ3 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ttc28Q80XJ3 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ttc28Q80XJ3 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ttc28Q80XJ3 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Ttc28Q80XJ3 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ttc28Q80XJ3 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ttc28Q80XJ3 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Ttc28Q80XJ3 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.63■□□□□ 0.89
Ttc28Q80XJ3 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ttc28Q80XJ3 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ttc28Q80XJ3 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ttc28Q80XJ3 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ttc28Q80XJ3 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.61■□□□□ 0.89
Ttc28Q80XJ3 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ttc28Q80XJ3 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ttc28Q80XJ3 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ttc28Q80XJ3 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ttc28Q80XJ3 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ttc28Q80XJ3 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ttc28Q80XJ3 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ttc28Q80XJ3 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ttc28Q80XJ3 Scarna2-201ENSMUST00000157560 414 ntBASIC20.58■□□□□ 0.88
Ttc28Q80XJ3 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Ttc28Q80XJ3 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ttc28Q80XJ3 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ttc28Q80XJ3 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.57■□□□□ 0.88
Ttc28Q80XJ3 Gm4799-201ENSMUST00000095396 657 ntBASIC20.56■□□□□ 0.88
Ttc28Q80XJ3 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ttc28Q80XJ3 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ttc28Q80XJ3 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ttc28Q80XJ3 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Ttc28Q80XJ3 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.55■□□□□ 0.88
Ttc28Q80XJ3 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.55■□□□□ 0.88
Ttc28Q80XJ3 Gm11687-201ENSMUST00000118911 886 ntBASIC20.54■□□□□ 0.88
Ttc28Q80XJ3 Gm9806-201ENSMUST00000051080 552 ntBASIC20.54■□□□□ 0.88
Ttc28Q80XJ3 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ttc28Q80XJ3 Gm30023-201ENSMUST00000197970 889 ntBASIC20.53■□□□□ 0.88
Ttc28Q80XJ3 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ttc28Q80XJ3 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.53■□□□□ 0.88
Ttc28Q80XJ3 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ttc28Q80XJ3 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ttc28Q80XJ3 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
Ttc28Q80XJ3 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ttc28Q80XJ3 Gm16437-201ENSMUST00000025669 507 ntBASIC20.52■□□□□ 0.88
Ttc28Q80XJ3 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Ttc28Q80XJ3 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.52■□□□□ 0.87
Ttc28Q80XJ3 Gm22567-201ENSMUST00000175542 342 ntBASIC20.51■□□□□ 0.87
Ttc28Q80XJ3 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ttc28Q80XJ3 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ttc28Q80XJ3 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.5■□□□□ 0.87
Ttc28Q80XJ3 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ttc28Q80XJ3 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ttc28Q80XJ3 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.49■□□□□ 0.87
Ttc28Q80XJ3 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ttc28Q80XJ3 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ttc28Q80XJ3 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Ttc28Q80XJ3 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ttc28Q80XJ3 Gm45364-201ENSMUST00000210883 159 ntBASIC20.48■□□□□ 0.87
Ttc28Q80XJ3 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.48■□□□□ 0.87
Ttc28Q80XJ3 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ttc28Q80XJ3 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ttc28Q80XJ3 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ttc28Q80XJ3 Gm7332-201ENSMUST00000118351 454 ntBASIC20.46■□□□□ 0.87
Ttc28Q80XJ3 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ttc28Q80XJ3 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.45■□□□□ 0.86
Ttc28Q80XJ3 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.45■□□□□ 0.86
Ttc28Q80XJ3 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ttc28Q80XJ3 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 142 ms