Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC38.52■■■■□ 3.76
Rpap1Q80TE0 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC38.51■■■■□ 3.76
Rpap1Q80TE0 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC38.49■■■■□ 3.75
Rpap1Q80TE0 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC38.48■■■■□ 3.75
Rpap1Q80TE0 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC38.47■■■■□ 3.75
Rpap1Q80TE0 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC38.47■■■■□ 3.75
Rpap1Q80TE0 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC38.47■■■■□ 3.75
Rpap1Q80TE0 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC38.46■■■■□ 3.75
Rpap1Q80TE0 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC38.44■■■■□ 3.74
Rpap1Q80TE0 Gm30023-201ENSMUST00000197970 889 ntBASIC38.44■■■■□ 3.74
Rpap1Q80TE0 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC38.44■■■■□ 3.74
Rpap1Q80TE0 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC38.43■■■■□ 3.74
Rpap1Q80TE0 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC38.42■■■■□ 3.74
Rpap1Q80TE0 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC38.42■■■■□ 3.74
Rpap1Q80TE0 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC38.42■■■■□ 3.74
Rpap1Q80TE0 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC38.41■■■■□ 3.74
Rpap1Q80TE0 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC38.41■■■■□ 3.74
Rpap1Q80TE0 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC38.39■■■■□ 3.74
Rpap1Q80TE0 Particl-201ENSMUST00000205370 1560 ntBASIC38.38■■■■□ 3.73
Rpap1Q80TE0 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC38.38■■■■□ 3.73
Rpap1Q80TE0 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC38.38■■■■□ 3.73
Rpap1Q80TE0 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC38.37■■■■□ 3.73
Rpap1Q80TE0 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC38.35■■■■□ 3.73
Rpap1Q80TE0 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC38.35■■■■□ 3.73
Rpap1Q80TE0 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC38.35■■■■□ 3.73
Rpap1Q80TE0 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC38.35■■■■□ 3.73
Rpap1Q80TE0 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC38.34■■■■□ 3.73
Rpap1Q80TE0 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC38.34■■■■□ 3.73
Rpap1Q80TE0 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC38.34■■■■□ 3.73
Rpap1Q80TE0 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC38.34■■■■□ 3.73
Rpap1Q80TE0 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC38.33■■■■□ 3.73
Rpap1Q80TE0 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC38.33■■■■□ 3.73
Rpap1Q80TE0 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC38.31■■■■□ 3.72
Rpap1Q80TE0 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC38.31■■■■□ 3.72
Rpap1Q80TE0 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC38.3■■■■□ 3.72
Rpap1Q80TE0 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC38.29■■■■□ 3.72
Rpap1Q80TE0 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC38.29■■■■□ 3.72
Rpap1Q80TE0 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC38.28■■■■□ 3.72
Rpap1Q80TE0 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC38.27■■■■□ 3.72
Rpap1Q80TE0 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC38.26■■■■□ 3.72
Rpap1Q80TE0 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC38.23■■■■□ 3.71
Rpap1Q80TE0 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC38.23■■■■□ 3.71
Rpap1Q80TE0 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC38.23■■■■□ 3.71
Rpap1Q80TE0 Pcf11-205ENSMUST00000208255 1720 ntBASIC38.23■■■■□ 3.71
Rpap1Q80TE0 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC38.21■■■■□ 3.71
Rpap1Q80TE0 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC38.21■■■■□ 3.71
Rpap1Q80TE0 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC38.18■■■■□ 3.7
Rpap1Q80TE0 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC38.17■■■■□ 3.7
Rpap1Q80TE0 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC38.17■■■■□ 3.7
Rpap1Q80TE0 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC38.17■■■■□ 3.7
Rpap1Q80TE0 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC38.15■■■■□ 3.7
Rpap1Q80TE0 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC38.14■■■■□ 3.7
Rpap1Q80TE0 Scarna2-201ENSMUST00000157560 414 ntBASIC38.13■■■■□ 3.7
Rpap1Q80TE0 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC38.13■■■■□ 3.7
Rpap1Q80TE0 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC38.12■■■■□ 3.69
Rpap1Q80TE0 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC38.12■■■■□ 3.69
Rpap1Q80TE0 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC38.12■■■■□ 3.69
Rpap1Q80TE0 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC38.11■■■■□ 3.69
Rpap1Q80TE0 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC38.11■■■■□ 3.69
Rpap1Q80TE0 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC38.11■■■■□ 3.69
Rpap1Q80TE0 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC38.11■■■■□ 3.69
Rpap1Q80TE0 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC38.1■■■■□ 3.69
Rpap1Q80TE0 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC38.09■■■■□ 3.69
Rpap1Q80TE0 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC38.09■■■■□ 3.69
Rpap1Q80TE0 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC38.09■■■■□ 3.69
Rpap1Q80TE0 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC38.09■■■■□ 3.69
Rpap1Q80TE0 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC38.08■■■■□ 3.69
Rpap1Q80TE0 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC38.08■■■■□ 3.69
Rpap1Q80TE0 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC38.08■■■■□ 3.69
Rpap1Q80TE0 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC38.08■■■■□ 3.69
Rpap1Q80TE0 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC38.07■■■■□ 3.69
Rpap1Q80TE0 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC38.07■■■■□ 3.68
Rpap1Q80TE0 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC38.06■■■■□ 3.68
Rpap1Q80TE0 Gm12366-201ENSMUST00000121722 873 ntBASIC38.06■■■■□ 3.68
Rpap1Q80TE0 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC38.06■■■■□ 3.68
Rpap1Q80TE0 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC38.06■■■■□ 3.68
Rpap1Q80TE0 Gm5786-201ENSMUST00000085368 882 ntBASIC38.06■■■■□ 3.68
Rpap1Q80TE0 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC38.05■■■■□ 3.68
Rpap1Q80TE0 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC38.04■■■■□ 3.68
Rpap1Q80TE0 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC38.04■■■■□ 3.68
Rpap1Q80TE0 Gm4799-201ENSMUST00000095396 657 ntBASIC38.02■■■■□ 3.68
Rpap1Q80TE0 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC38.01■■■■□ 3.68
Rpap1Q80TE0 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC38.01■■■■□ 3.68
Rpap1Q80TE0 Gm9806-201ENSMUST00000051080 552 ntBASIC38.01■■■■□ 3.68
Rpap1Q80TE0 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC38.01■■■■□ 3.67
Rpap1Q80TE0 Gm11687-201ENSMUST00000118911 886 ntBASIC37.99■■■■□ 3.67
Rpap1Q80TE0 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC37.98■■■■□ 3.67
Rpap1Q80TE0 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC37.98■■■■□ 3.67
Rpap1Q80TE0 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC37.98■■■■□ 3.67
Rpap1Q80TE0 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC37.97■■■■□ 3.67
Rpap1Q80TE0 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC37.97■■■■□ 3.67
Rpap1Q80TE0 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC37.97■■■■□ 3.67
Rpap1Q80TE0 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC37.95■■■■□ 3.67
Rpap1Q80TE0 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC37.95■■■■□ 3.67
Rpap1Q80TE0 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC37.95■■■■□ 3.66
Rpap1Q80TE0 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC37.94■■■■□ 3.66
Rpap1Q80TE0 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC37.93■■■■□ 3.66
Rpap1Q80TE0 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC37.92■■■■□ 3.66
Rpap1Q80TE0 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC37.92■■■■□ 3.66
Rpap1Q80TE0 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC37.91■■■■□ 3.66
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms