Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Ush1gQ80T11 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Ush1gQ80T11 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
Ush1gQ80T11 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Ush1gQ80T11 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC26.36■■□□□ 1.81
Ush1gQ80T11 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Ush1gQ80T11 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
Ush1gQ80T11 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC26.35■■□□□ 1.81
Ush1gQ80T11 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Ush1gQ80T11 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC26.34■■□□□ 1.81
Ush1gQ80T11 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Ush1gQ80T11 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Ush1gQ80T11 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Ush1gQ80T11 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
Ush1gQ80T11 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
Ush1gQ80T11 Gm9905-201ENSMUST00000065740 1845 ntBASIC26.32■■□□□ 1.8
Ush1gQ80T11 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
Ush1gQ80T11 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Ush1gQ80T11 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Ush1gQ80T11 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Ush1gQ80T11 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Ush1gQ80T11 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Ush1gQ80T11 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Ush1gQ80T11 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Ush1gQ80T11 AC131739.1-201ENSMUST00000221692 1245 ntBASIC26.29■■□□□ 1.8
Ush1gQ80T11 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
Ush1gQ80T11 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Ush1gQ80T11 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Ush1gQ80T11 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Ush1gQ80T11 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Ush1gQ80T11 Gm11175-201ENSMUST00000116172 543 ntBASIC26.26■■□□□ 1.79
Ush1gQ80T11 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC26.25■■□□□ 1.79
Ush1gQ80T11 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Ush1gQ80T11 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Ush1gQ80T11 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Ush1gQ80T11 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
Ush1gQ80T11 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Ush1gQ80T11 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Ush1gQ80T11 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
Ush1gQ80T11 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Ush1gQ80T11 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Ush1gQ80T11 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Ush1gQ80T11 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC26.21■■□□□ 1.79
Ush1gQ80T11 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
Ush1gQ80T11 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Ush1gQ80T11 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Ush1gQ80T11 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
Ush1gQ80T11 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC26.2■■□□□ 1.79
Ush1gQ80T11 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Ush1gQ80T11 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
Ush1gQ80T11 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
Ush1gQ80T11 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC26.19■■□□□ 1.78
Ush1gQ80T11 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Ush1gQ80T11 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC26.17■■□□□ 1.78
Ush1gQ80T11 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Ush1gQ80T11 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC26.17■■□□□ 1.78
Ush1gQ80T11 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Ush1gQ80T11 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
Ush1gQ80T11 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Ush1gQ80T11 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC26.15■■□□□ 1.78
Ush1gQ80T11 Gm6311-201ENSMUST00000073790 878 ntBASIC26.14■■□□□ 1.78
Ush1gQ80T11 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC26.13■■□□□ 1.77
Ush1gQ80T11 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC26.13■■□□□ 1.77
Ush1gQ80T11 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Ush1gQ80T11 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Ush1gQ80T11 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Ush1gQ80T11 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC26.12■■□□□ 1.77
Ush1gQ80T11 Cap2-205ENSMUST00000225824 1634 ntBASIC26.12■■□□□ 1.77
Ush1gQ80T11 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Ush1gQ80T11 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Ush1gQ80T11 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC26.09■■□□□ 1.77
Ush1gQ80T11 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC26.09■■□□□ 1.77
Ush1gQ80T11 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
Ush1gQ80T11 Amer2-203ENSMUST00000225247 2662 ntBASIC26.08■■□□□ 1.77
Ush1gQ80T11 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Ush1gQ80T11 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC26.08■■□□□ 1.77
Ush1gQ80T11 AC167019.3-201ENSMUST00000228225 1266 ntBASIC26.08■■□□□ 1.77
Ush1gQ80T11 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Ush1gQ80T11 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Ush1gQ80T11 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Ush1gQ80T11 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC26.06■■□□□ 1.76
Ush1gQ80T11 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Ush1gQ80T11 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC26.05■■□□□ 1.76
Ush1gQ80T11 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Ush1gQ80T11 Pcf11-205ENSMUST00000208255 1720 ntBASIC26.04■■□□□ 1.76
Ush1gQ80T11 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
Ush1gQ80T11 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Ush1gQ80T11 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC26.02■■□□□ 1.76
Ush1gQ80T11 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC26.02■■□□□ 1.76
Ush1gQ80T11 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC26.01■■□□□ 1.75
Ush1gQ80T11 Particl-201ENSMUST00000205370 1560 ntBASIC26■■□□□ 1.75
Ush1gQ80T11 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Ush1gQ80T11 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
Ush1gQ80T11 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Ush1gQ80T11 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC25.98■■□□□ 1.75
Ush1gQ80T11 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Ush1gQ80T11 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Ush1gQ80T11 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC25.96■■□□□ 1.75
Ush1gQ80T11 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC25.96■■□□□ 1.75
Ush1gQ80T11 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC25.96■■□□□ 1.75
Retrieved 100 of 76,532 protein–RNA pairs in 87.5 ms