Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Cspg5Q71M36 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC24.59■■□□□ 1.53
Cspg5Q71M36 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC24.59■■□□□ 1.53
Cspg5Q71M36 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Cspg5Q71M36 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
Cspg5Q71M36 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Cspg5Q71M36 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Cspg5Q71M36 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
Cspg5Q71M36 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Cspg5Q71M36 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Cspg5Q71M36 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
Cspg5Q71M36 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Cspg5Q71M36 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC24.55■■□□□ 1.52
Cspg5Q71M36 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Cspg5Q71M36 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Cspg5Q71M36 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Cspg5Q71M36 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC24.52■■□□□ 1.52
Cspg5Q71M36 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Cspg5Q71M36 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Cspg5Q71M36 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC24.52■■□□□ 1.52
Cspg5Q71M36 Gm6345-201ENSMUST00000180378 1691 ntBASIC24.52■■□□□ 1.52
Cspg5Q71M36 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
Cspg5Q71M36 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Cspg5Q71M36 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
Cspg5Q71M36 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
Cspg5Q71M36 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Cspg5Q71M36 AC131739.1-201ENSMUST00000221692 1245 ntBASIC24.49■■□□□ 1.51
Cspg5Q71M36 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Cspg5Q71M36 Gm43445-201ENSMUST00000198564 2091 ntBASIC24.49■■□□□ 1.51
Cspg5Q71M36 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
Cspg5Q71M36 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
Cspg5Q71M36 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
Cspg5Q71M36 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC24.47■■□□□ 1.51
Cspg5Q71M36 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Cspg5Q71M36 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Cspg5Q71M36 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Cspg5Q71M36 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
Cspg5Q71M36 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Cspg5Q71M36 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Cspg5Q71M36 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Cspg5Q71M36 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC24.45■■□□□ 1.5
Cspg5Q71M36 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
Cspg5Q71M36 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
Cspg5Q71M36 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Cspg5Q71M36 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Cspg5Q71M36 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Cspg5Q71M36 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Cspg5Q71M36 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Cspg5Q71M36 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Cspg5Q71M36 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC24.43■■□□□ 1.5
Cspg5Q71M36 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Cspg5Q71M36 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
Cspg5Q71M36 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Cspg5Q71M36 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Cspg5Q71M36 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Cspg5Q71M36 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC24.42■■□□□ 1.5
Cspg5Q71M36 AC167019.3-201ENSMUST00000228225 1266 ntBASIC24.42■■□□□ 1.5
Cspg5Q71M36 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Cspg5Q71M36 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Cspg5Q71M36 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Cspg5Q71M36 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Cspg5Q71M36 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Cspg5Q71M36 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Cspg5Q71M36 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Cspg5Q71M36 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Cspg5Q71M36 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
Cspg5Q71M36 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
Cspg5Q71M36 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
Cspg5Q71M36 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Cspg5Q71M36 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Cspg5Q71M36 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
Cspg5Q71M36 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Cspg5Q71M36 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Cspg5Q71M36 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC24.37■■□□□ 1.49
Cspg5Q71M36 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC24.37■■□□□ 1.49
Cspg5Q71M36 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Cspg5Q71M36 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Cspg5Q71M36 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Cspg5Q71M36 Amer2-203ENSMUST00000225247 2662 ntBASIC24.35■■□□□ 1.49
Cspg5Q71M36 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Cspg5Q71M36 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC24.35■■□□□ 1.49
Cspg5Q71M36 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC24.34■■□□□ 1.49
Cspg5Q71M36 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Cspg5Q71M36 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
Cspg5Q71M36 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Cspg5Q71M36 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Cspg5Q71M36 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC24.32■■□□□ 1.48
Cspg5Q71M36 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Cspg5Q71M36 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
Cspg5Q71M36 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC24.31■■□□□ 1.48
Cspg5Q71M36 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Cspg5Q71M36 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
Cspg5Q71M36 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC24.3■■□□□ 1.48
Cspg5Q71M36 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Cspg5Q71M36 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Cspg5Q71M36 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Cspg5Q71M36 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Cspg5Q71M36 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
Cspg5Q71M36 Gm30023-201ENSMUST00000197970 889 ntBASIC24.29■■□□□ 1.48
Cspg5Q71M36 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms