Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smarcd3Q6P9Z1 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Smarcd3Q6P9Z1 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.73■■□□□ 1.07
Smarcd3Q6P9Z1 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smarcd3Q6P9Z1 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Smarcd3Q6P9Z1 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Smarcd3Q6P9Z1 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Smarcd3Q6P9Z1 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Smarcd3Q6P9Z1 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Smarcd3Q6P9Z1 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Smarcd3Q6P9Z1 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Smarcd3Q6P9Z1 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Smarcd3Q6P9Z1 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Smarcd3Q6P9Z1 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Smarcd3Q6P9Z1 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Smarcd3Q6P9Z1 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smarcd3Q6P9Z1 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smarcd3Q6P9Z1 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smarcd3Q6P9Z1 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Smarcd3Q6P9Z1 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.69■■□□□ 1.06
Smarcd3Q6P9Z1 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Smarcd3Q6P9Z1 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Smarcd3Q6P9Z1 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Smarcd3Q6P9Z1 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Smarcd3Q6P9Z1 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Smarcd3Q6P9Z1 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Smarcd3Q6P9Z1 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Smarcd3Q6P9Z1 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Smarcd3Q6P9Z1 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Smarcd3Q6P9Z1 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Smarcd3Q6P9Z1 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
Smarcd3Q6P9Z1 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Smarcd3Q6P9Z1 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Smarcd3Q6P9Z1 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Smarcd3Q6P9Z1 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Smarcd3Q6P9Z1 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.65■■□□□ 1.06
Smarcd3Q6P9Z1 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
Smarcd3Q6P9Z1 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Smarcd3Q6P9Z1 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Smarcd3Q6P9Z1 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Smarcd3Q6P9Z1 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC21.63■■□□□ 1.05
Smarcd3Q6P9Z1 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Smarcd3Q6P9Z1 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Smarcd3Q6P9Z1 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.61■■□□□ 1.05
Smarcd3Q6P9Z1 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Smarcd3Q6P9Z1 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.61■■□□□ 1.05
Smarcd3Q6P9Z1 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Smarcd3Q6P9Z1 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Smarcd3Q6P9Z1 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Smarcd3Q6P9Z1 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Smarcd3Q6P9Z1 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Smarcd3Q6P9Z1 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.58■■□□□ 1.05
Smarcd3Q6P9Z1 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Smarcd3Q6P9Z1 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Smarcd3Q6P9Z1 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
Smarcd3Q6P9Z1 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Smarcd3Q6P9Z1 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Smarcd3Q6P9Z1 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
Smarcd3Q6P9Z1 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC21.57■■□□□ 1.04
Smarcd3Q6P9Z1 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Smarcd3Q6P9Z1 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Smarcd3Q6P9Z1 Zfp131-205ENSMUST00000223812 663 ntBASIC21.56■■□□□ 1.04
Smarcd3Q6P9Z1 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Smarcd3Q6P9Z1 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.56■■□□□ 1.04
Smarcd3Q6P9Z1 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
Smarcd3Q6P9Z1 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Smarcd3Q6P9Z1 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.55■■□□□ 1.04
Smarcd3Q6P9Z1 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Smarcd3Q6P9Z1 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.55■■□□□ 1.04
Smarcd3Q6P9Z1 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Smarcd3Q6P9Z1 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Smarcd3Q6P9Z1 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Smarcd3Q6P9Z1 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC21.53■■□□□ 1.04
Smarcd3Q6P9Z1 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Smarcd3Q6P9Z1 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
Smarcd3Q6P9Z1 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Smarcd3Q6P9Z1 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Smarcd3Q6P9Z1 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Smarcd3Q6P9Z1 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Smarcd3Q6P9Z1 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.51■■□□□ 1.03
Smarcd3Q6P9Z1 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Smarcd3Q6P9Z1 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Smarcd3Q6P9Z1 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Smarcd3Q6P9Z1 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.48■■□□□ 1.03
Smarcd3Q6P9Z1 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.48■■□□□ 1.03
Smarcd3Q6P9Z1 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC21.48■■□□□ 1.03
Smarcd3Q6P9Z1 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Smarcd3Q6P9Z1 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Smarcd3Q6P9Z1 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Smarcd3Q6P9Z1 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Smarcd3Q6P9Z1 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Smarcd3Q6P9Z1 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.46■■□□□ 1.03
Smarcd3Q6P9Z1 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Smarcd3Q6P9Z1 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Smarcd3Q6P9Z1 Gm9397-201ENSMUST00000200125 605 ntBASIC21.45■■□□□ 1.02
Smarcd3Q6P9Z1 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC21.45■■□□□ 1.02
Smarcd3Q6P9Z1 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Smarcd3Q6P9Z1 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Smarcd3Q6P9Z1 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Smarcd3Q6P9Z1 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms