Protein–RNA interactions for Protein: Q64705

Usf2, Upstream stimulatory factor 2, mousemouse

Known RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf2Q64705 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC19.96■□□□□ 0.79
Usf2Q64705 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Usf2Q64705 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Usf2Q64705 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19.95■□□□□ 0.79
Usf2Q64705 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
Usf2Q64705 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Usf2Q64705 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Usf2Q64705 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Usf2Q64705 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Usf2Q64705 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Usf2Q64705 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usf2Q64705 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC19.93■□□□□ 0.78
Usf2Q64705 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Usf2Q64705 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Usf2Q64705 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Usf2Q64705 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Usf2Q64705 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Usf2Q64705 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Usf2Q64705 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC19.92■□□□□ 0.78
Usf2Q64705 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Usf2Q64705 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Usf2Q64705 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Usf2Q64705 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Usf2Q64705 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.9■□□□□ 0.78
Usf2Q64705 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Usf2Q64705 Tdp2-203ENSMUST00000223804 1136 ntBASIC19.9■□□□□ 0.78
Usf2Q64705 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Usf2Q64705 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.9■□□□□ 0.78
Usf2Q64705 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Usf2Q64705 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC19.89■□□□□ 0.77
Usf2Q64705 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC19.89■□□□□ 0.77
Usf2Q64705 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Usf2Q64705 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
Usf2Q64705 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usf2Q64705 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Usf2Q64705 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usf2Q64705 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Usf2Q64705 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Usf2Q64705 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Usf2Q64705 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Usf2Q64705 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usf2Q64705 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usf2Q64705 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Usf2Q64705 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC19.85■□□□□ 0.77
Usf2Q64705 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Usf2Q64705 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Usf2Q64705 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Usf2Q64705 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Usf2Q64705 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Usf2Q64705 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC19.83■□□□□ 0.77
Usf2Q64705 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Usf2Q64705 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Usf2Q64705 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Usf2Q64705 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC19.82■□□□□ 0.76
Usf2Q64705 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Usf2Q64705 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
Usf2Q64705 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC19.81■□□□□ 0.76
Usf2Q64705 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
Usf2Q64705 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usf2Q64705 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Usf2Q64705 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Usf2Q64705 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usf2Q64705 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Usf2Q64705 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Usf2Q64705 Gm9397-201ENSMUST00000200125 605 ntBASIC19.78■□□□□ 0.76
Usf2Q64705 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Usf2Q64705 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC19.78■□□□□ 0.76
Usf2Q64705 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usf2Q64705 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Usf2Q64705 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usf2Q64705 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Usf2Q64705 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usf2Q64705 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Usf2Q64705 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usf2Q64705 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC19.76■□□□□ 0.75
Usf2Q64705 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usf2Q64705 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usf2Q64705 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.75■□□□□ 0.75
Usf2Q64705 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC19.75■□□□□ 0.75
Usf2Q64705 Gm45855-201ENSMUST00000212546 880 ntBASIC19.75■□□□□ 0.75
Usf2Q64705 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usf2Q64705 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usf2Q64705 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usf2Q64705 Gm43863-201ENSMUST00000203822 1192 ntBASIC19.74■□□□□ 0.75
Usf2Q64705 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Usf2Q64705 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Usf2Q64705 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usf2Q64705 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Usf2Q64705 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Usf2Q64705 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usf2Q64705 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Usf2Q64705 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Usf2Q64705 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usf2Q64705 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC19.71■□□□□ 0.75
Usf2Q64705 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Usf2Q64705 Amer2-203ENSMUST00000225247 2662 ntBASIC19.7■□□□□ 0.74
Usf2Q64705 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.7■□□□□ 0.74
Usf2Q64705 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Usf2Q64705 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Usf2Q64705 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms