Protein–RNA interactions for Protein: Q61418

Clcn4, H(+)/Cl(-) exchange transporter 4, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4Q61418 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Clcn4Q61418 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Clcn4Q61418 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Clcn4Q61418 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Clcn4Q61418 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Clcn4Q61418 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.78■■□□□ 1.08
Clcn4Q61418 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Clcn4Q61418 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Clcn4Q61418 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Clcn4Q61418 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Clcn4Q61418 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC21.77■■□□□ 1.08
Clcn4Q61418 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Clcn4Q61418 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Clcn4Q61418 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.76■■□□□ 1.07
Clcn4Q61418 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.76■■□□□ 1.07
Clcn4Q61418 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Clcn4Q61418 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Clcn4Q61418 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.76■■□□□ 1.07
Clcn4Q61418 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Clcn4Q61418 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Clcn4Q61418 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Clcn4Q61418 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Clcn4Q61418 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Clcn4Q61418 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.73■■□□□ 1.07
Clcn4Q61418 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Clcn4Q61418 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Clcn4Q61418 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Clcn4Q61418 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Clcn4Q61418 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Clcn4Q61418 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC21.71■■□□□ 1.07
Clcn4Q61418 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Clcn4Q61418 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Clcn4Q61418 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Clcn4Q61418 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Clcn4Q61418 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Clcn4Q61418 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.69■■□□□ 1.06
Clcn4Q61418 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.69■■□□□ 1.06
Clcn4Q61418 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
Clcn4Q61418 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Clcn4Q61418 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Clcn4Q61418 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Clcn4Q61418 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
Clcn4Q61418 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Clcn4Q61418 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Clcn4Q61418 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.67■■□□□ 1.06
Clcn4Q61418 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Clcn4Q61418 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Clcn4Q61418 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Clcn4Q61418 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Clcn4Q61418 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Clcn4Q61418 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Clcn4Q61418 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.65■■□□□ 1.06
Clcn4Q61418 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Clcn4Q61418 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Clcn4Q61418 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Clcn4Q61418 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Clcn4Q61418 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Clcn4Q61418 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Clcn4Q61418 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.64■■□□□ 1.05
Clcn4Q61418 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Clcn4Q61418 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Clcn4Q61418 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Clcn4Q61418 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Clcn4Q61418 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Clcn4Q61418 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Clcn4Q61418 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Clcn4Q61418 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Clcn4Q61418 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Clcn4Q61418 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.6■■□□□ 1.05
Clcn4Q61418 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Clcn4Q61418 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.59■■□□□ 1.05
Clcn4Q61418 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Clcn4Q61418 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.58■■□□□ 1.05
Clcn4Q61418 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Clcn4Q61418 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
Clcn4Q61418 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.58■■□□□ 1.04
Clcn4Q61418 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Clcn4Q61418 Gm9939-201ENSMUST00000067161 1154 ntBASIC21.57■■□□□ 1.04
Clcn4Q61418 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Clcn4Q61418 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Clcn4Q61418 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Clcn4Q61418 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Clcn4Q61418 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.56■■□□□ 1.04
Clcn4Q61418 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Clcn4Q61418 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Clcn4Q61418 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Clcn4Q61418 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Clcn4Q61418 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Clcn4Q61418 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.54■■□□□ 1.04
Clcn4Q61418 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Clcn4Q61418 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Clcn4Q61418 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Clcn4Q61418 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Clcn4Q61418 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Clcn4Q61418 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Clcn4Q61418 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Clcn4Q61418 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Clcn4Q61418 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Clcn4Q61418 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Clcn4Q61418 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms