Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Shisa3Q3UPR0 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Shisa3Q3UPR0 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Shisa3Q3UPR0 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.6■□□□□ 0.89
Shisa3Q3UPR0 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.59■□□□□ 0.89
Shisa3Q3UPR0 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Shisa3Q3UPR0 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Shisa3Q3UPR0 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Shisa3Q3UPR0 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Shisa3Q3UPR0 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
Shisa3Q3UPR0 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Shisa3Q3UPR0 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Shisa3Q3UPR0 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Shisa3Q3UPR0 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.56■□□□□ 0.88
Shisa3Q3UPR0 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Shisa3Q3UPR0 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Shisa3Q3UPR0 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
Shisa3Q3UPR0 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Shisa3Q3UPR0 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Shisa3Q3UPR0 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Shisa3Q3UPR0 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Shisa3Q3UPR0 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Shisa3Q3UPR0 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Shisa3Q3UPR0 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Shisa3Q3UPR0 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Shisa3Q3UPR0 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.53■□□□□ 0.88
Shisa3Q3UPR0 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Shisa3Q3UPR0 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Shisa3Q3UPR0 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Shisa3Q3UPR0 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC20.51■□□□□ 0.87
Shisa3Q3UPR0 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC20.51■□□□□ 0.87
Shisa3Q3UPR0 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Shisa3Q3UPR0 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Shisa3Q3UPR0 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Shisa3Q3UPR0 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Shisa3Q3UPR0 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Shisa3Q3UPR0 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Shisa3Q3UPR0 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.5■□□□□ 0.87
Shisa3Q3UPR0 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Shisa3Q3UPR0 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Shisa3Q3UPR0 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Shisa3Q3UPR0 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20.49■□□□□ 0.87
Shisa3Q3UPR0 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Shisa3Q3UPR0 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Shisa3Q3UPR0 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Shisa3Q3UPR0 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.48■□□□□ 0.87
Shisa3Q3UPR0 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Shisa3Q3UPR0 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Shisa3Q3UPR0 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Shisa3Q3UPR0 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Shisa3Q3UPR0 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Shisa3Q3UPR0 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Shisa3Q3UPR0 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Shisa3Q3UPR0 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Shisa3Q3UPR0 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Shisa3Q3UPR0 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.45■□□□□ 0.87
Shisa3Q3UPR0 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Shisa3Q3UPR0 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Shisa3Q3UPR0 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.44■□□□□ 0.86
Shisa3Q3UPR0 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Shisa3Q3UPR0 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Shisa3Q3UPR0 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Shisa3Q3UPR0 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Shisa3Q3UPR0 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Shisa3Q3UPR0 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Shisa3Q3UPR0 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Shisa3Q3UPR0 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Shisa3Q3UPR0 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
Shisa3Q3UPR0 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Shisa3Q3UPR0 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Shisa3Q3UPR0 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.39■□□□□ 0.85
Shisa3Q3UPR0 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Shisa3Q3UPR0 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Shisa3Q3UPR0 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Shisa3Q3UPR0 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Shisa3Q3UPR0 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Shisa3Q3UPR0 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Shisa3Q3UPR0 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Shisa3Q3UPR0 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Shisa3Q3UPR0 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.36■□□□□ 0.85
Shisa3Q3UPR0 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Shisa3Q3UPR0 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Shisa3Q3UPR0 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Shisa3Q3UPR0 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Shisa3Q3UPR0 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
Shisa3Q3UPR0 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Shisa3Q3UPR0 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Shisa3Q3UPR0 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Shisa3Q3UPR0 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Shisa3Q3UPR0 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Shisa3Q3UPR0 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.34■□□□□ 0.85
Shisa3Q3UPR0 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Shisa3Q3UPR0 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Shisa3Q3UPR0 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Shisa3Q3UPR0 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Shisa3Q3UPR0 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Shisa3Q3UPR0 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Shisa3Q3UPR0 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Shisa3Q3UPR0 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Shisa3Q3UPR0 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms