Protein–RNA interactions for Protein: Q3UHK8

Tnrc6a, Trinucleotide repeat-containing gene 6A protein, mousemouse

Known RBP Predictions only

Length 1,896 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc6aQ3UHK8 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
Tnrc6aQ3UHK8 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Tnrc6aQ3UHK8 Gm6206-201ENSMUST00000133472 2199 ntBASIC22.71■■□□□ 1.23
Tnrc6aQ3UHK8 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Tnrc6aQ3UHK8 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Tnrc6aQ3UHK8 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Tnrc6aQ3UHK8 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Tnrc6aQ3UHK8 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Tnrc6aQ3UHK8 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Tnrc6aQ3UHK8 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Tnrc6aQ3UHK8 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
Tnrc6aQ3UHK8 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Tnrc6aQ3UHK8 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Tnrc6aQ3UHK8 AC131739.1-201ENSMUST00000221692 1245 ntBASIC22.67■■□□□ 1.22
Tnrc6aQ3UHK8 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Tnrc6aQ3UHK8 Gm43445-201ENSMUST00000198564 2091 ntBASIC22.67■■□□□ 1.22
Tnrc6aQ3UHK8 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
Tnrc6aQ3UHK8 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Tnrc6aQ3UHK8 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC22.64■■□□□ 1.22
Tnrc6aQ3UHK8 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC22.64■■□□□ 1.22
Tnrc6aQ3UHK8 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Tnrc6aQ3UHK8 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Tnrc6aQ3UHK8 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Tnrc6aQ3UHK8 AC167019.3-201ENSMUST00000228225 1266 ntBASIC22.6■■□□□ 1.21
Tnrc6aQ3UHK8 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC22.59■■□□□ 1.21
Tnrc6aQ3UHK8 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC22.59■■□□□ 1.21
Tnrc6aQ3UHK8 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Tnrc6aQ3UHK8 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Tnrc6aQ3UHK8 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Tnrc6aQ3UHK8 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Tnrc6aQ3UHK8 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Tnrc6aQ3UHK8 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Tnrc6aQ3UHK8 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Tnrc6aQ3UHK8 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC22.56■■□□□ 1.2
Tnrc6aQ3UHK8 Gm30023-201ENSMUST00000197970 889 ntBASIC22.56■■□□□ 1.2
Tnrc6aQ3UHK8 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC22.55■■□□□ 1.2
Tnrc6aQ3UHK8 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Tnrc6aQ3UHK8 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC22.54■■□□□ 1.2
Tnrc6aQ3UHK8 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
Tnrc6aQ3UHK8 Particl-201ENSMUST00000205370 1560 ntBASIC22.54■■□□□ 1.2
Tnrc6aQ3UHK8 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC22.54■■□□□ 1.2
Tnrc6aQ3UHK8 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Tnrc6aQ3UHK8 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Tnrc6aQ3UHK8 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Tnrc6aQ3UHK8 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC22.52■■□□□ 1.2
Tnrc6aQ3UHK8 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Tnrc6aQ3UHK8 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Tnrc6aQ3UHK8 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC22.5■■□□□ 1.19
Tnrc6aQ3UHK8 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Tnrc6aQ3UHK8 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Tnrc6aQ3UHK8 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
Tnrc6aQ3UHK8 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC22.48■■□□□ 1.19
Tnrc6aQ3UHK8 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
Tnrc6aQ3UHK8 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Tnrc6aQ3UHK8 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
Tnrc6aQ3UHK8 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC22.47■■□□□ 1.19
Tnrc6aQ3UHK8 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Tnrc6aQ3UHK8 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Tnrc6aQ3UHK8 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Tnrc6aQ3UHK8 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Tnrc6aQ3UHK8 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
Tnrc6aQ3UHK8 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Tnrc6aQ3UHK8 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Tnrc6aQ3UHK8 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
Tnrc6aQ3UHK8 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Tnrc6aQ3UHK8 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Tnrc6aQ3UHK8 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Tnrc6aQ3UHK8 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC22.44■■□□□ 1.18
Tnrc6aQ3UHK8 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Tnrc6aQ3UHK8 Gm6311-201ENSMUST00000073790 878 ntBASIC22.43■■□□□ 1.18
Tnrc6aQ3UHK8 Cap2-205ENSMUST00000225824 1634 ntBASIC22.43■■□□□ 1.18
Tnrc6aQ3UHK8 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Tnrc6aQ3UHK8 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC22.42■■□□□ 1.18
Tnrc6aQ3UHK8 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Tnrc6aQ3UHK8 Pcf11-205ENSMUST00000208255 1720 ntBASIC22.41■■□□□ 1.18
Tnrc6aQ3UHK8 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
Tnrc6aQ3UHK8 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
Tnrc6aQ3UHK8 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC22.39■■□□□ 1.17
Tnrc6aQ3UHK8 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
Tnrc6aQ3UHK8 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Tnrc6aQ3UHK8 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Tnrc6aQ3UHK8 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Tnrc6aQ3UHK8 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Tnrc6aQ3UHK8 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Tnrc6aQ3UHK8 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Tnrc6aQ3UHK8 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC22.37■■□□□ 1.17
Tnrc6aQ3UHK8 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Tnrc6aQ3UHK8 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
Tnrc6aQ3UHK8 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Tnrc6aQ3UHK8 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Tnrc6aQ3UHK8 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Tnrc6aQ3UHK8 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Tnrc6aQ3UHK8 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
Tnrc6aQ3UHK8 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Tnrc6aQ3UHK8 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Tnrc6aQ3UHK8 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
Tnrc6aQ3UHK8 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Tnrc6aQ3UHK8 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Tnrc6aQ3UHK8 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Tnrc6aQ3UHK8 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms