Protein–RNA interactions for Protein: Q3U466

Cln6, Ceroid-lipofuscinosis, neuronal 6, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6Q3U466 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cln6Q3U466 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.18■□□□□ 0.82
Cln6Q3U466 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cln6Q3U466 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cln6Q3U466 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cln6Q3U466 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cln6Q3U466 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Cln6Q3U466 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Cln6Q3U466 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cln6Q3U466 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Cln6Q3U466 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cln6Q3U466 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Cln6Q3U466 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Cln6Q3U466 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cln6Q3U466 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cln6Q3U466 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cln6Q3U466 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC20.13■□□□□ 0.81
Cln6Q3U466 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Cln6Q3U466 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Cln6Q3U466 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cln6Q3U466 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Cln6Q3U466 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Cln6Q3U466 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cln6Q3U466 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Cln6Q3U466 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cln6Q3U466 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
Cln6Q3U466 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cln6Q3U466 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.1■□□□□ 0.81
Cln6Q3U466 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Cln6Q3U466 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cln6Q3U466 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cln6Q3U466 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cln6Q3U466 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Cln6Q3U466 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC20.08■□□□□ 0.81
Cln6Q3U466 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cln6Q3U466 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cln6Q3U466 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Cln6Q3U466 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cln6Q3U466 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cln6Q3U466 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cln6Q3U466 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Cln6Q3U466 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Cln6Q3U466 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cln6Q3U466 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cln6Q3U466 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cln6Q3U466 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cln6Q3U466 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.05■□□□□ 0.8
Cln6Q3U466 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cln6Q3U466 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cln6Q3U466 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cln6Q3U466 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Cln6Q3U466 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Cln6Q3U466 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.04■□□□□ 0.8
Cln6Q3U466 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cln6Q3U466 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cln6Q3U466 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cln6Q3U466 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cln6Q3U466 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cln6Q3U466 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cln6Q3U466 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cln6Q3U466 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cln6Q3U466 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cln6Q3U466 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cln6Q3U466 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
Cln6Q3U466 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Cln6Q3U466 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cln6Q3U466 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Cln6Q3U466 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.99■□□□□ 0.79
Cln6Q3U466 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cln6Q3U466 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.98■□□□□ 0.79
Cln6Q3U466 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cln6Q3U466 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cln6Q3U466 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.97■□□□□ 0.79
Cln6Q3U466 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cln6Q3U466 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cln6Q3U466 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cln6Q3U466 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC19.96■□□□□ 0.79
Cln6Q3U466 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Cln6Q3U466 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cln6Q3U466 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cln6Q3U466 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cln6Q3U466 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cln6Q3U466 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cln6Q3U466 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Cln6Q3U466 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cln6Q3U466 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cln6Q3U466 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Cln6Q3U466 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cln6Q3U466 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cln6Q3U466 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cln6Q3U466 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Cln6Q3U466 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cln6Q3U466 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Cln6Q3U466 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cln6Q3U466 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cln6Q3U466 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cln6Q3U466 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cln6Q3U466 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cln6Q3U466 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.89■□□□□ 0.78
Cln6Q3U466 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms