Protein–RNA interactions for Protein: Q3U2A8

Vars2, Valine--tRNA ligase, mitochondrial, mousemouse

Predictions only

Length 1,060 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vars2Q3U2A8 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC31,31■■■□□ 2,6
Vars2Q3U2A8 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC31,31■■■□□ 2,6
Vars2Q3U2A8 Particl-201ENSMUST00000205370 1560 ntBASIC31,3■■■□□ 2,6
Vars2Q3U2A8 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC31,3■■■□□ 2,6
Vars2Q3U2A8 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC31,3■■■□□ 2,6
Vars2Q3U2A8 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC31,29■■■□□ 2,6
Vars2Q3U2A8 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC31,28■■■□□ 2,6
Vars2Q3U2A8 Gm9806-201ENSMUST00000051080 552 ntBASIC31,28■■■□□ 2,6
Vars2Q3U2A8 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC31,27■■■□□ 2,6
Vars2Q3U2A8 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC31,27■■■□□ 2,6
Vars2Q3U2A8 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC31,27■■■□□ 2,6
Vars2Q3U2A8 Gm4799-201ENSMUST00000095396 657 ntBASIC31,27■■■□□ 2,6
Vars2Q3U2A8 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC31,25■■■□□ 2,59
Vars2Q3U2A8 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC31,23■■■□□ 2,59
Vars2Q3U2A8 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC31,22■■■□□ 2,59
Vars2Q3U2A8 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC31,22■■■□□ 2,59
Vars2Q3U2A8 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC31,21■■■□□ 2,59
Vars2Q3U2A8 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC31,2■■■□□ 2,59
Vars2Q3U2A8 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC31,2■■■□□ 2,59
Vars2Q3U2A8 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC31,19■■■□□ 2,58
Vars2Q3U2A8 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC31,18■■■□□ 2,58
Vars2Q3U2A8 Gm16437-201ENSMUST00000025669 507 ntBASIC31,18■■■□□ 2,58
Vars2Q3U2A8 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC31,18■■■□□ 2,58
Vars2Q3U2A8 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC31,18■■■□□ 2,58
Vars2Q3U2A8 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC31,18■■■□□ 2,58
Vars2Q3U2A8 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC31,17■■■□□ 2,58
Vars2Q3U2A8 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC31,17■■■□□ 2,58
Vars2Q3U2A8 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC31,17■■■□□ 2,58
Vars2Q3U2A8 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC31,16■■■□□ 2,58
Vars2Q3U2A8 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC31,16■■■□□ 2,58
Vars2Q3U2A8 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC31,15■■■□□ 2,58
Vars2Q3U2A8 Gm7332-201ENSMUST00000118351 454 ntBASIC31,14■■■□□ 2,58
Vars2Q3U2A8 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC31,14■■■□□ 2,58
Vars2Q3U2A8 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC31,14■■■□□ 2,57
Vars2Q3U2A8 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC31,13■■■□□ 2,57
Vars2Q3U2A8 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC31,13■■■□□ 2,57
Vars2Q3U2A8 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC31,11■■■□□ 2,57
Vars2Q3U2A8 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC31,11■■■□□ 2,57
Vars2Q3U2A8 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC31,1■■■□□ 2,57
Vars2Q3U2A8 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC31,09■■■□□ 2,57
Vars2Q3U2A8 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC31,09■■■□□ 2,57
Vars2Q3U2A8 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC31,09■■■□□ 2,57
Vars2Q3U2A8 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC31,08■■■□□ 2,57
Vars2Q3U2A8 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC31,08■■■□□ 2,57
Vars2Q3U2A8 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC31,07■■■□□ 2,56
Vars2Q3U2A8 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC31,07■■■□□ 2,56
Vars2Q3U2A8 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC31,07■■■□□ 2,56
Vars2Q3U2A8 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC31,05■■■□□ 2,56
Vars2Q3U2A8 Gm22567-201ENSMUST00000175542 342 ntBASIC31,05■■■□□ 2,56
Vars2Q3U2A8 Gm30023-201ENSMUST00000197970 889 ntBASIC31,05■■■□□ 2,56
Vars2Q3U2A8 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC31,04■■■□□ 2,56
Vars2Q3U2A8 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC31,04■■■□□ 2,56
Vars2Q3U2A8 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC31,04■■■□□ 2,56
Vars2Q3U2A8 Pkd1-207ENSMUST00000228550 1050 ntBASIC31,03■■■□□ 2,56
Vars2Q3U2A8 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC31,03■■■□□ 2,56
Vars2Q3U2A8 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC31,03■■■□□ 2,56
Vars2Q3U2A8 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC31,02■■■□□ 2,56
Vars2Q3U2A8 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC31,02■■■□□ 2,56
Vars2Q3U2A8 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC31,01■■■□□ 2,56
Vars2Q3U2A8 Gm27502-201ENSMUST00000183495 199 ntBASIC31,01■■■□□ 2,55
Vars2Q3U2A8 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC31,01■■■□□ 2,55
Vars2Q3U2A8 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2,55
Vars2Q3U2A8 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2,55
Vars2Q3U2A8 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC30,99■■■□□ 2,55
Vars2Q3U2A8 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC30,98■■■□□ 2,55
Vars2Q3U2A8 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC30,98■■■□□ 2,55
Vars2Q3U2A8 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC30,98■■■□□ 2,55
Vars2Q3U2A8 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC30,96■■■□□ 2,55
Vars2Q3U2A8 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC30,96■■■□□ 2,55
Vars2Q3U2A8 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC30,94■■■□□ 2,54
Vars2Q3U2A8 AC154454.1-201ENSMUST00000225253 216 ntBASIC30,93■■■□□ 2,54
Vars2Q3U2A8 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC30,92■■■□□ 2,54
Vars2Q3U2A8 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC30,92■■■□□ 2,54
Vars2Q3U2A8 Gm2415-204ENSMUST00000190235 2004 ntBASIC30,88■■■□□ 2,53
Vars2Q3U2A8 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC30,87■■■□□ 2,53
Vars2Q3U2A8 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC30,87■■■□□ 2,53
Vars2Q3U2A8 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC30,87■■■□□ 2,53
Vars2Q3U2A8 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC30,86■■■□□ 2,53
Vars2Q3U2A8 Gm5812-201ENSMUST00000061073 957 ntBASIC30,86■■■□□ 2,53
Vars2Q3U2A8 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC30,86■■■□□ 2,53
Vars2Q3U2A8 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC30,85■■■□□ 2,53
Vars2Q3U2A8 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC30,85■■■□□ 2,53
Vars2Q3U2A8 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC30,84■■■□□ 2,53
Vars2Q3U2A8 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC30,84■■■□□ 2,53
Vars2Q3U2A8 Mir3960-201ENSMUST00000198213 73 ntBASIC30,84■■■□□ 2,53
Vars2Q3U2A8 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC30,83■■■□□ 2,53
Vars2Q3U2A8 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC30,83■■■□□ 2,53
Vars2Q3U2A8 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC30,81■■■□□ 2,52
Vars2Q3U2A8 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC30,81■■■□□ 2,52
Vars2Q3U2A8 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC30,8■■■□□ 2,52
Vars2Q3U2A8 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC30,8■■■□□ 2,52
Vars2Q3U2A8 Gm45364-201ENSMUST00000210883 159 ntBASIC30,8■■■□□ 2,52
Vars2Q3U2A8 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC30,8■■■□□ 2,52
Vars2Q3U2A8 Gm14523-201ENSMUST00000117260 558 ntBASIC30,79■■■□□ 2,52
Vars2Q3U2A8 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC30,78■■■□□ 2,52
Vars2Q3U2A8 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC30,78■■■□□ 2,52
Vars2Q3U2A8 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC30,77■■■□□ 2,52
Vars2Q3U2A8 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC30,76■■■□□ 2,52
Vars2Q3U2A8 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC30,76■■■□□ 2,51
Vars2Q3U2A8 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC30,76■■■□□ 2,51
Retrieved 100 of 76,532 protein–RNA pairs in 12,5 ms