Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Cks1bP61025 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cks1bP61025 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cks1bP61025 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cks1bP61025 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cks1bP61025 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cks1bP61025 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cks1bP61025 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cks1bP61025 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
Cks1bP61025 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC16.73■□□□□ 0.27
Cks1bP61025 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cks1bP61025 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Cks1bP61025 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC16.72■□□□□ 0.27
Cks1bP61025 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cks1bP61025 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Cks1bP61025 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cks1bP61025 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cks1bP61025 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Cks1bP61025 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Cks1bP61025 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cks1bP61025 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Cks1bP61025 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cks1bP61025 Gm17082-201ENSMUST00000166043 1091 ntBASIC16.71■□□□□ 0.27
Cks1bP61025 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC16.71■□□□□ 0.27
Cks1bP61025 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cks1bP61025 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Cks1bP61025 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC16.7■□□□□ 0.26
Cks1bP61025 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Cks1bP61025 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC16.69■□□□□ 0.26
Cks1bP61025 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cks1bP61025 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cks1bP61025 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cks1bP61025 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cks1bP61025 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cks1bP61025 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Cks1bP61025 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC16.68■□□□□ 0.26
Cks1bP61025 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cks1bP61025 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cks1bP61025 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cks1bP61025 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cks1bP61025 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
Cks1bP61025 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cks1bP61025 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
Cks1bP61025 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cks1bP61025 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cks1bP61025 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cks1bP61025 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cks1bP61025 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Cks1bP61025 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Cks1bP61025 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cks1bP61025 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cks1bP61025 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cks1bP61025 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cks1bP61025 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cks1bP61025 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cks1bP61025 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cks1bP61025 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cks1bP61025 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cks1bP61025 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cks1bP61025 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cks1bP61025 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cks1bP61025 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Cks1bP61025 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC16.62■□□□□ 0.25
Cks1bP61025 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cks1bP61025 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC16.62■□□□□ 0.25
Cks1bP61025 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cks1bP61025 AC124392.1-201ENSMUST00000225172 5324 ntBASIC16.6■□□□□ 0.25
Cks1bP61025 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Cks1bP61025 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cks1bP61025 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cks1bP61025 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC16.6■□□□□ 0.25
Cks1bP61025 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Cks1bP61025 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cks1bP61025 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cks1bP61025 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cks1bP61025 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cks1bP61025 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cks1bP61025 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
Cks1bP61025 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cks1bP61025 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Cks1bP61025 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cks1bP61025 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cks1bP61025 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cks1bP61025 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cks1bP61025 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cks1bP61025 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cks1bP61025 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cks1bP61025 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC16.57■□□□□ 0.24
Cks1bP61025 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cks1bP61025 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cks1bP61025 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cks1bP61025 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC16.57■□□□□ 0.24
Cks1bP61025 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cks1bP61025 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Cks1bP61025 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cks1bP61025 Gm30346-201ENSMUST00000218641 1699 ntBASIC16.56■□□□□ 0.24
Cks1bP61025 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Cks1bP61025 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Cks1bP61025 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cks1bP61025 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 334.8 ms