Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC31,21■■■□□ 2,59
Msh6P54276 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC31,21■■■□□ 2,59
Msh6P54276 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC31,2■■■□□ 2,59
Msh6P54276 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC31,2■■■□□ 2,59
Msh6P54276 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC31,19■■■□□ 2,58
Msh6P54276 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC31,19■■■□□ 2,58
Msh6P54276 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC31,19■■■□□ 2,58
Msh6P54276 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC31,19■■■□□ 2,58
Msh6P54276 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC31,18■■■□□ 2,58
Msh6P54276 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC31,17■■■□□ 2,58
Msh6P54276 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC31,16■■■□□ 2,58
Msh6P54276 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC31,14■■■□□ 2,58
Msh6P54276 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC31,13■■■□□ 2,57
Msh6P54276 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC31,13■■■□□ 2,57
Msh6P54276 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC31,13■■■□□ 2,57
Msh6P54276 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC31,13■■■□□ 2,57
Msh6P54276 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC31,12■■■□□ 2,57
Msh6P54276 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC31,12■■■□□ 2,57
Msh6P54276 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC31,11■■■□□ 2,57
Msh6P54276 Gm43445-201ENSMUST00000198564 2091 ntBASIC31,11■■■□□ 2,57
Msh6P54276 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC31,1■■■□□ 2,57
Msh6P54276 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC31,1■■■□□ 2,57
Msh6P54276 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC31,1■■■□□ 2,57
Msh6P54276 Cap2-205ENSMUST00000225824 1634 ntBASIC31,1■■■□□ 2,57
Msh6P54276 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC31,09■■■□□ 2,57
Msh6P54276 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC31,08■■■□□ 2,57
Msh6P54276 AC131739.1-201ENSMUST00000221692 1245 ntBASIC31,07■■■□□ 2,56
Msh6P54276 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC31,06■■■□□ 2,56
Msh6P54276 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC31,06■■■□□ 2,56
Msh6P54276 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC31,05■■■□□ 2,56
Msh6P54276 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC31,05■■■□□ 2,56
Msh6P54276 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC31,05■■■□□ 2,56
Msh6P54276 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC31,04■■■□□ 2,56
Msh6P54276 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC31,04■■■□□ 2,56
Msh6P54276 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC31,04■■■□□ 2,56
Msh6P54276 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC31,03■■■□□ 2,56
Msh6P54276 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC31,03■■■□□ 2,56
Msh6P54276 Gm6206-201ENSMUST00000133472 2199 ntBASIC31,03■■■□□ 2,56
Msh6P54276 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC31,03■■■□□ 2,56
Msh6P54276 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC31,02■■■□□ 2,56
Msh6P54276 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC31,02■■■□□ 2,56
Msh6P54276 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC31,01■■■□□ 2,56
Msh6P54276 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC31■■■□□ 2,55
Msh6P54276 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC30,99■■■□□ 2,55
Msh6P54276 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC30,98■■■□□ 2,55
Msh6P54276 Pcf11-205ENSMUST00000208255 1720 ntBASIC30,98■■■□□ 2,55
Msh6P54276 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC30,97■■■□□ 2,55
Msh6P54276 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC30,97■■■□□ 2,55
Msh6P54276 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC30,96■■■□□ 2,55
Msh6P54276 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC30,95■■■□□ 2,55
Msh6P54276 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC30,94■■■□□ 2,54
Msh6P54276 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC30,93■■■□□ 2,54
Msh6P54276 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC30,93■■■□□ 2,54
Msh6P54276 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC30,93■■■□□ 2,54
Msh6P54276 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC30,92■■■□□ 2,54
Msh6P54276 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC30,92■■■□□ 2,54
Msh6P54276 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC30,92■■■□□ 2,54
Msh6P54276 AC167019.3-201ENSMUST00000228225 1266 ntBASIC30,92■■■□□ 2,54
Msh6P54276 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC30,91■■■□□ 2,54
Msh6P54276 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC30,91■■■□□ 2,54
Msh6P54276 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC30,91■■■□□ 2,54
Msh6P54276 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC30,91■■■□□ 2,54
Msh6P54276 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC30,9■■■□□ 2,54
Msh6P54276 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC30,89■■■□□ 2,54
Msh6P54276 Gm9905-201ENSMUST00000065740 1845 ntBASIC30,88■■■□□ 2,53
Msh6P54276 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC30,87■■■□□ 2,53
Msh6P54276 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC30,87■■■□□ 2,53
Msh6P54276 Gm6311-201ENSMUST00000073790 878 ntBASIC30,87■■■□□ 2,53
Msh6P54276 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC30,86■■■□□ 2,53
Msh6P54276 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC30,85■■■□□ 2,53
Msh6P54276 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC30,85■■■□□ 2,53
Msh6P54276 Gm30023-201ENSMUST00000197970 889 ntBASIC30,85■■■□□ 2,53
Msh6P54276 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC30,85■■■□□ 2,53
Msh6P54276 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC30,84■■■□□ 2,53
Msh6P54276 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC30,84■■■□□ 2,53
Msh6P54276 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC30,84■■■□□ 2,53
Msh6P54276 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC30,84■■■□□ 2,53
Msh6P54276 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC30,84■■■□□ 2,53
Msh6P54276 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC30,83■■■□□ 2,53
Msh6P54276 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC30,82■■■□□ 2,52
Msh6P54276 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC30,82■■■□□ 2,52
Msh6P54276 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC30,82■■■□□ 2,52
Msh6P54276 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC30,81■■■□□ 2,52
Msh6P54276 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC30,8■■■□□ 2,52
Msh6P54276 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC30,8■■■□□ 2,52
Msh6P54276 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC30,79■■■□□ 2,52
Msh6P54276 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC30,79■■■□□ 2,52
Msh6P54276 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC30,78■■■□□ 2,52
Msh6P54276 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC30,78■■■□□ 2,52
Msh6P54276 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC30,78■■■□□ 2,52
Msh6P54276 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC30,77■■■□□ 2,52
Msh6P54276 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC30,76■■■□□ 2,51
Msh6P54276 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC30,76■■■□□ 2,51
Msh6P54276 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC30,76■■■□□ 2,51
Msh6P54276 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC30,74■■■□□ 2,51
Msh6P54276 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC30,74■■■□□ 2,51
Msh6P54276 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC30,73■■■□□ 2,51
Msh6P54276 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC30,73■■■□□ 2,51
Msh6P54276 Particl-201ENSMUST00000205370 1560 ntBASIC30,72■■■□□ 2,51
Msh6P54276 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC30,71■■■□□ 2,51
Retrieved 100 of 76,532 protein–RNA pairs in 14,5 ms