Protein–RNA interactions for Protein: P51954

Nek1, Serine/threonine-protein kinase Nek1, mousemouse

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek1P51954 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC26.73■■□□□ 1.87
Nek1P51954 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Nek1P51954 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC26.73■■□□□ 1.87
Nek1P51954 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC26.73■■□□□ 1.87
Nek1P51954 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Nek1P51954 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC26.72■■□□□ 1.87
Nek1P51954 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC26.72■■□□□ 1.87
Nek1P51954 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Nek1P51954 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC26.71■■□□□ 1.87
Nek1P51954 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC26.7■■□□□ 1.86
Nek1P51954 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Nek1P51954 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
Nek1P51954 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
Nek1P51954 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Nek1P51954 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Nek1P51954 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Nek1P51954 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC26.69■■□□□ 1.86
Nek1P51954 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC26.68■■□□□ 1.86
Nek1P51954 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC26.67■■□□□ 1.86
Nek1P51954 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC26.67■■□□□ 1.86
Nek1P51954 Gm5987-201ENSMUST00000196433 1151 ntBASIC26.67■■□□□ 1.86
Nek1P51954 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC26.66■■□□□ 1.86
Nek1P51954 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC26.66■■□□□ 1.86
Nek1P51954 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC26.66■■□□□ 1.86
Nek1P51954 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Nek1P51954 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC26.66■■□□□ 1.86
Nek1P51954 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Nek1P51954 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
Nek1P51954 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Nek1P51954 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Nek1P51954 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Nek1P51954 Gm24970-201ENSMUST00000175582 82 ntBASIC26.64■■□□□ 1.86
Nek1P51954 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
Nek1P51954 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
Nek1P51954 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Nek1P51954 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC26.62■■□□□ 1.85
Nek1P51954 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Nek1P51954 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Nek1P51954 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Nek1P51954 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC26.6■■□□□ 1.85
Nek1P51954 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Nek1P51954 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC26.59■■□□□ 1.85
Nek1P51954 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Nek1P51954 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC26.58■■□□□ 1.85
Nek1P51954 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC26.58■■□□□ 1.85
Nek1P51954 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
Nek1P51954 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC26.58■■□□□ 1.85
Nek1P51954 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Nek1P51954 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Nek1P51954 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Nek1P51954 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC26.53■■□□□ 1.84
Nek1P51954 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Nek1P51954 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
Nek1P51954 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC26.53■■□□□ 1.84
Nek1P51954 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Nek1P51954 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
Nek1P51954 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
Nek1P51954 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.84
Nek1P51954 Gm9939-201ENSMUST00000067161 1154 ntBASIC26.51■■□□□ 1.83
Nek1P51954 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC26.5■■□□□ 1.83
Nek1P51954 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Nek1P51954 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Nek1P51954 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
Nek1P51954 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
Nek1P51954 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Nek1P51954 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Nek1P51954 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC26.48■■□□□ 1.83
Nek1P51954 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC26.47■■□□□ 1.83
Nek1P51954 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Nek1P51954 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC26.45■■□□□ 1.83
Nek1P51954 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Nek1P51954 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC26.45■■□□□ 1.82
Nek1P51954 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC26.45■■□□□ 1.82
Nek1P51954 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Nek1P51954 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC26.44■■□□□ 1.82
Nek1P51954 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Nek1P51954 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC26.43■■□□□ 1.82
Nek1P51954 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Nek1P51954 Gm43863-201ENSMUST00000203822 1192 ntBASIC26.42■■□□□ 1.82
Nek1P51954 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Nek1P51954 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Nek1P51954 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Nek1P51954 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Nek1P51954 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Nek1P51954 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Nek1P51954 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC26.38■■□□□ 1.81
Nek1P51954 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Nek1P51954 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Nek1P51954 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC26.37■■□□□ 1.81
Nek1P51954 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Nek1P51954 Gm6821-201ENSMUST00000107540 542 ntBASIC26.35■■□□□ 1.81
Nek1P51954 AC122428.3-201ENSMUST00000215551 2290 ntBASIC26.35■■□□□ 1.81
Nek1P51954 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Nek1P51954 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
Nek1P51954 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
Nek1P51954 AC157572.2-201ENSMUST00000226970 908 ntBASIC26.33■■□□□ 1.81
Nek1P51954 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
Nek1P51954 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Nek1P51954 Gm8503-201ENSMUST00000118131 455 ntBASIC26.32■■□□□ 1.8
Nek1P51954 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Retrieved 100 of 76,532 protein–RNA pairs in 101.3 ms