Protein–RNA interactions for Protein: P08775

Polr2a, DNA-directed RNA polymerase II subunit RPB1, mousemouse

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2aP08775 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
Polr2aP08775 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
Polr2aP08775 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC28.59■■■□□ 2.17
Polr2aP08775 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC28.58■■■□□ 2.17
Polr2aP08775 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Polr2aP08775 Particl-201ENSMUST00000205370 1560 ntBASIC28.57■■■□□ 2.16
Polr2aP08775 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Polr2aP08775 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Polr2aP08775 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC28.56■■■□□ 2.16
Polr2aP08775 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
Polr2aP08775 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC28.55■■■□□ 2.16
Polr2aP08775 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC28.53■■■□□ 2.16
Polr2aP08775 Gm12366-201ENSMUST00000121722 873 ntBASIC28.53■■■□□ 2.16
Polr2aP08775 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC28.53■■■□□ 2.16
Polr2aP08775 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
Polr2aP08775 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC28.53■■■□□ 2.16
Polr2aP08775 Gm5786-201ENSMUST00000085368 882 ntBASIC28.53■■■□□ 2.16
Polr2aP08775 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
Polr2aP08775 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC28.53■■■□□ 2.16
Polr2aP08775 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC28.51■■■□□ 2.16
Polr2aP08775 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC28.51■■■□□ 2.15
Polr2aP08775 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
Polr2aP08775 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC28.48■■■□□ 2.15
Polr2aP08775 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
Polr2aP08775 Gm30023-201ENSMUST00000197970 889 ntBASIC28.48■■■□□ 2.15
Polr2aP08775 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC28.47■■■□□ 2.15
Polr2aP08775 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC28.47■■■□□ 2.15
Polr2aP08775 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Polr2aP08775 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Polr2aP08775 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
Polr2aP08775 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Polr2aP08775 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC28.45■■■□□ 2.15
Polr2aP08775 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC28.44■■■□□ 2.14
Polr2aP08775 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Polr2aP08775 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Polr2aP08775 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Polr2aP08775 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
Polr2aP08775 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Polr2aP08775 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Polr2aP08775 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC28.39■■■□□ 2.14
Polr2aP08775 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC28.39■■■□□ 2.13
Polr2aP08775 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
Polr2aP08775 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Polr2aP08775 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Polr2aP08775 Scarna2-201ENSMUST00000157560 414 ntBASIC28.35■■■□□ 2.13
Polr2aP08775 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC28.35■■■□□ 2.13
Polr2aP08775 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Polr2aP08775 Gm11687-201ENSMUST00000118911 886 ntBASIC28.34■■■□□ 2.13
Polr2aP08775 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Polr2aP08775 Gm4799-201ENSMUST00000095396 657 ntBASIC28.33■■■□□ 2.13
Polr2aP08775 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC28.32■■■□□ 2.12
Polr2aP08775 Gm7332-201ENSMUST00000118351 454 ntBASIC28.32■■■□□ 2.12
Polr2aP08775 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
Polr2aP08775 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
Polr2aP08775 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC28.32■■■□□ 2.12
Polr2aP08775 Pkd1-207ENSMUST00000228550 1050 ntBASIC28.32■■■□□ 2.12
Polr2aP08775 Gm16437-201ENSMUST00000025669 507 ntBASIC28.32■■■□□ 2.12
Polr2aP08775 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Polr2aP08775 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC28.31■■■□□ 2.12
Polr2aP08775 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC28.31■■■□□ 2.12
Polr2aP08775 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC28.3■■■□□ 2.12
Polr2aP08775 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Polr2aP08775 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Polr2aP08775 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Polr2aP08775 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Polr2aP08775 Gm45364-201ENSMUST00000210883 159 ntBASIC28.29■■■□□ 2.12
Polr2aP08775 Gm9806-201ENSMUST00000051080 552 ntBASIC28.29■■■□□ 2.12
Polr2aP08775 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC28.28■■■□□ 2.12
Polr2aP08775 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC28.28■■■□□ 2.12
Polr2aP08775 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC28.27■■■□□ 2.12
Polr2aP08775 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Polr2aP08775 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Polr2aP08775 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC28.26■■■□□ 2.11
Polr2aP08775 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC28.25■■■□□ 2.11
Polr2aP08775 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Polr2aP08775 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC28.24■■■□□ 2.11
Polr2aP08775 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC28.23■■■□□ 2.11
Polr2aP08775 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Polr2aP08775 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Polr2aP08775 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
Polr2aP08775 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC28.22■■■□□ 2.11
Polr2aP08775 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Polr2aP08775 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
Polr2aP08775 Pcf11-205ENSMUST00000208255 1720 ntBASIC28.21■■■□□ 2.11
Polr2aP08775 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC28.2■■■□□ 2.11
Polr2aP08775 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
Polr2aP08775 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC28.19■■■□□ 2.1
Polr2aP08775 Gm27502-201ENSMUST00000183495 199 ntBASIC28.18■■■□□ 2.1
Polr2aP08775 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC28.17■■■□□ 2.1
Polr2aP08775 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC28.17■■■□□ 2.1
Polr2aP08775 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Polr2aP08775 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Polr2aP08775 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Polr2aP08775 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Polr2aP08775 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC28.14■■■□□ 2.1
Polr2aP08775 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Polr2aP08775 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Polr2aP08775 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC28.13■■■□□ 2.09
Polr2aP08775 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC28.12■■■□□ 2.09
Polr2aP08775 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC28.11■■■□□ 2.09
Retrieved 100 of 76,532 protein–RNA pairs in 143.7 ms