Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
P04224 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
P04224 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
P04224 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
P04224 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
P04224 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
P04224 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.68■□□□□ 0.9
P04224 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
P04224 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
P04224 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.67■□□□□ 0.9
P04224 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
P04224 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
P04224 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
P04224 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
P04224 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.66■□□□□ 0.9
P04224 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.65■□□□□ 0.9
P04224 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
P04224 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
P04224 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
P04224 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
P04224 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.64■□□□□ 0.89
P04224 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
P04224 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
P04224 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
P04224 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
P04224 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
P04224 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
P04224 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
P04224 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
P04224 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
P04224 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
P04224 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
P04224 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.6■□□□□ 0.89
P04224 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
P04224 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.6■□□□□ 0.89
P04224 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
P04224 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
P04224 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
P04224 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
P04224 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
P04224 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
P04224 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
P04224 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
P04224 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
P04224 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
P04224 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
P04224 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
P04224 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
P04224 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
P04224 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
P04224 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
P04224 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
P04224 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
P04224 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
P04224 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
P04224 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
P04224 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
P04224 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
P04224 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
P04224 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
P04224 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
P04224 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
P04224 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
P04224 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
P04224 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
P04224 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.53■□□□□ 0.88
P04224 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
P04224 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
P04224 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
P04224 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
P04224 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.87
P04224 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
P04224 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
P04224 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
P04224 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
P04224 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
P04224 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
P04224 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
P04224 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
P04224 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
P04224 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
P04224 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
P04224 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.48■□□□□ 0.87
P04224 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC20.48■□□□□ 0.87
P04224 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
P04224 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
P04224 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
P04224 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
P04224 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
P04224 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
P04224 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
P04224 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
P04224 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
P04224 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
P04224 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
P04224 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
P04224 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
P04224 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
P04224 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
P04224 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms